Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1452 111 1e-19 >seq1452 Length=168077 Score = 111 bits (122), Expect = 1e-19 Identities = 264/398 (66%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 27328 ACGTAAAACTG---ACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 27384 ||||||||||| | | || ||||||||| || || ||||||| | ||| ||| Sbjct 36505 ACGTAAAACTGCGCAAACAT---GTGGCACGGCGGCAGGACCATGAGCTTGAGGTCCTTG 36561 Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 27444 || ||||| |||| | || ||||| | ||| | |||||| | | || || |||| Sbjct 36562 GGATTCCATGCGCTGAGGACCATGCGACGGTCGTACGGGTTGGTGCGGAGCTTGTGCACG 36621 Query 27445 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCT 27504 | | ||||| || || ||| |||| |||||| | ||| |||||||| Sbjct 36622 ACCTCAGCAAGCTGGTCGACGCCCTGACCCGTGTAGTCGGCGTGGCAGTCGGTGTACTCG 36681 Query 27505 GCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 27564 || || || |||| ||| || || ||||| || || |||||||| ||| | || | ||| Sbjct 36682 GCGCCAAAGTGCCGCCACTGAAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGATGC 36741 Query 27565 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 27624 | | |||| | ||||| || || | | |||||| ||||||||||||| ||||| Sbjct 36742 TGCAGGCCCAGCCCGTCCAGGAACTCGCGGCTGCCGTTGCCGTCCCAGATCTTGACCCCG 36801 Query 27625 TTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 27684 ||| || ||||| || | || ||||||||||| ||||| | | Sbjct 36802 GCGTCGCTCAGGGGTTTGGCCGACGTCGCGCCCGACACGAACCACAGGAGCTCGAGGATG 36861 Query 27685 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 |||||| | | ||||| | ||| || || || || || Sbjct 36862 ACGGCCCGCGAGAAGACGCGCTTCGTTGTCAGCAGCGG 36899 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 27087 CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGG 27146 |||||| ||| ||| ||||| || || ||||| | ||| ||||| ||| || | Sbjct 36183 CCTGTTGATCTCGAGTTCTGGAAACGGCCTTGGCTCGCGCTCCAGCTGCGTCCGGAGTGC 36242 Query 27147 TTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTC 27206 || ||||| || ||||||||| ||||| |||| | ||| | | || || | Sbjct 36243 GTCGACGTGGTCGGCGTAGACGTGCGCGTCGCCCATGACGTGCGTCAGCGACCCGGGCAC 36302 Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266 || || || || | || ||||||| ||| | || | ||||||||| || || ||||| Sbjct 36303 AAGACCCGTTGCGCGCGCGATCATGTGCGTCAACAGCGCGTAGCTGGCAATATTGAAGGG 36362 Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308 || || || |||||||| | ||||| |||||||||||| || Sbjct 36363 CACGCCCAGGCCCATGTCGCACGACCGCTGGTAGAGCTGGCA 36404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369498283329380