Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_031228.1 Length=60606 Score E Sequences producing significant alignments: (Bits) Value seq1069 165 3e-36 seq1047 118 4e-22 >seq1069 Length=856 Score = 165 bits (182), Expect = 3e-36 Identities = 273/392 (70%), Gaps = 4/392 (1%) Strand=Plus/Minus Query 45738 GAACTGCTCGTACGAAAGGCCGAGTGATGCGGCGATGTTCCTGAGCAACGATTCTTCATA 45797 |||||||||||| || ||||| || |||||| |||| | |||||||||||||| | Sbjct 742 GAACTGCTCGTAGGACAGGCCCAGGCCTGCGGCAATGTAGCGCAGCAACGATTCTTCGAA 683 Query 45798 ATCGGTTCCGACTCCGCCCGGCGTTCCTGCGGGCTGCATTTTCAGTTTCGTACCGGGGAA 45857 | ||||| || || || || || || ||||||||| ||| ||||| |||||| Sbjct 682 AGGCGTTCCAACACCACCGGGAGTCCCCATGGGCTGCATGCGCAGCTTCGTGTTGGGGAA 623 Query 45858 CAGGTGCGGGATTTTCGCCCCGTCGATTGCGATGTTTTTCGATCCGGCGATGTACTCGGC 45917 ||| |||||||| || || || || ||| ||| | | | ||||||| || Sbjct 622 CAGCTGCGGGATCTTGGCACCATCAATTTGAATGGCGCCGGCAGCACCCATGTACTGAGC 563 Query 45918 CAGACTCCCCATGTAGGTTTTCAGG--ATGTCGCCGAAAGGCGTCTGTCCCATCCCCATC 45975 ||| || ||||||| | ||| | | | ||||||| ||||| || |||||| Sbjct 562 CAGCATCGACATGTAG--TCGTAGGCCACGGCACCGAAAGTGGTCTGACCTTGACCCATC 505 Query 45976 TGATTGAAGACCACGTCAGACGGCAATTCTGATTCGATGGCGGCCGCGTAGGTCGCGTTG 46035 | |||| || | ||||||||| ||||| | |||||| || || | ||||| Sbjct 504 GCAGCCGCAACCATATCGGCCGGCAATTCCGATTCCAGGGCGGCGGCATACGAGGCGTTT 445 Query 46036 ACGATGGCGTTTTGCAGCGTGACTTCCTGAAAGTTTCGGGTCATCTTCATCTGCTTCAAC 46095 || | ||||| |||| ||| || ||||| || || ||||||||| |||||||||| | Sbjct 444 ACCACCGCGTTCTGCAACGTCACGTCCTGGAAATTCTTGGTCATCTTGATCTGCTTCAGC 385 Query 46096 GCTGCGACCATTTCACTGATACCGCGAGTCTG 46127 | | ||||| || ||||| || |||||||| Sbjct 384 ACGGACACCATGTCGCTGATGCCACGAGTCTG 353 >seq1047 Length=3112 Score = 118 bits (130), Expect = 4e-22 Identities = 414/637 (65%), Gaps = 16/637 (3%) Strand=Plus/Plus Query 48504 GCAATGCGGACACGGCCATTTCCAGCGGCGGCGGTCGCCTCGGTTGTACAGGCCGACAAT 48563 ||| ||||| || ||||| | ||||||||| || || || ||||| || || ||| ||| Sbjct 124 GCAGTGCGGGCAGGGCCAATACCAGCGGCGACGATCCCCACGGTTATAGAGCGCGAGAAT 183 Query 48564 CCCGTCACACGGCGGGGCTTCGTGGGGCGTG---CGCTTAATCCAGCTTGGGTCTTTAAT 48620 || ||||| || ||||| | || ||| ||||| | || || ||| Sbjct 184 GCCAGTGGTTGGCGGCGCCTCGTGCGCCGACGAACGC---ATCCACTTCGGATCAAGAAT 240 Query 48621 CGGGCGCGATGGCGATGACTCGGCTGCACA-CATGGCAAACGACCCGAAGGTCGTCGTAC 48679 || || || ||||| ||||| || | || ||| ||||| ||||| || || || | Sbjct 241 GGGTCGAGACGGCGACGACTCCGC-GAACGTCATTGCAAAGCTGCCGAACGTGGTGGTCC 299 Query 48680 GTTTTGATGCGAGGTCGAAGGCGTTACCGTCGCCACCGATGTCGTCGTCAATACGGTCGT 48739 | |||| || | |||||| | ||| |||||||| |||||||||||| || ||||||| Sbjct 300 GCTTTGCAGCCAAGTCGAACGGGTTGCCGTCGCCGTTGATGTCGTCGTCCATGCGGTCGT 359 Query 48740 AGTCGGTGATGATGATGCGGCCAACGGGACGCCCGGCCAGTTCGGTTACTGACGGATAAC 48799 ||||||| | | || |||| || ||||| | || || || ||||| | Sbjct 360 AGTCGGTCAGCACAGCACGACCAATTGGCTTACCGGCGAACTCAGTCACAGACGGCCACG 419 Query 48800 TCAACGTCAGGATGATGCCTGTGACGTAGTGTTTGTCGAATTTGTTGTCGGCGTCGCGGT 48859 ||||||||| | || || ||| |||| ||||||| ||| ||||| | ||| Sbjct 420 ACAACGTCAGCAGCATTCCGTTGATGTAGGTCTTGTCGAGAACGTTATCGGC--AGAGGT 477 Query 48860 TCTTCATCAGCAT---TTCGCCCACCTTCGGGCTATGGCGGTGAAGACGGTCTACACGTC 48916 | || | || | ||| | | | ||| || ||| ||||| || | ||| | Sbjct 478 GC-CAATACGAATGTGCTTGCCGATGTCCTTGCTGTGAATGTGCAGACGATCAATACGAC 536 Query 48917 GCATCGAGAAGTCGCGCGCGGCCGTTGACGTCGGGCAGTAGACCATCAGATCCATCGGGT 48976 | | |||||| || || |||| | ||| ||||| | || |||||||| | Sbjct 537 GATTGCTGAAGTCTCGGGCCGCCGCCATAGATGGGTTATAGACAACCATGTCCATCGGTT 596 Query 48977 CAACTTTCACCGAATAGACAATGCTATTCAGGATCAGCGCATCGGTTTTACCGGACTGCG 49036 | | | || ||| | | || || | || | || |||||||| || ||||||| Sbjct 597 CGCATGTGACATGGTAGCCCACGCCGTTTACGACGATAGCGTCGGTTTTGCCCGACTGCG 656 Query 49037 CCGGGCCGACAAACGCCATCTTGTCGTACG-CCCGGCTGTTCATCATGTTCATCGGCTCG 49095 |||| ||| ||||| ||| | ||| | ||||| | |||| |||||| Sbjct 657 CCGGCCCGCAGAACGCAGCCTTAT-TCACGTCGCGGCTTGACCAAATGTCGCACGGCTCA 715 Query 49096 ACCATGTACGGCGTCGTCGAGTTAAGCCAATCCCCGA 49132 ||||||||||||||| || ||| ||| || |||| Sbjct 716 ACCATGTACGGCGTCATCTCGTTCTTCCAGTCGCCGA 752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193813042863680