Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1909 141 2e-28 seq46 134 3e-26 seq1536 129 1e-24 >seq1909 Length=49172 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || || ||||| || || |||||||| ||| || ||| Sbjct 40440 CAAATCTTCGTCAAGACTCTTACCGGCAAAACAATTACACTCGAGGTTGAATCGTCCGAC 40381 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||||||| |||||||| ||||| || || || || || ||||| || Sbjct 40380 ACGATCGACAACGTCAAATCCAAGATTCAAGACAAGGAGGGTATTCCGCCTGACCAACAG 40321 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || ||||| || ||||| ||||| | | || || || || Sbjct 40320 CGCTTGATCTTCGCGGGTAAGCAGCTGGAGGATGGCCGGACTTTGTCTGACTACAATATC 40261 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||||||||| Sbjct 40260 CAGAAGGAGTCGACTCTGCATCTTGT 40235 Score = 129 bits (142), Expect = 1e-24 Identities = 142/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||| ||||| || || ||||| || || ||||| || ||| ||| Sbjct 40896 CAGATTTTCGTCAAAACCCTCACGGGTAAGACGATTACTCTGGAGGTCGAGTCCTCGGAC 40837 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| || ||||| || || || || |||||||| ||| Sbjct 40836 ACCATCGACAATGTGAAGTCGAAGATCCAAGACAAGGAGGGTATTCCCCCGGACCAACAA 40777 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || ||||| || || || |||||||| |||| || ||| | Sbjct 40776 CGTCTCATTTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACTCTTTCCGACTACAACATT 40717 Query 178104 CAAAAAGAA 178112 || || ||| Sbjct 40716 CAGAAGGAA 40708 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||| | || || || || ||||| | ||||| || |||||| Sbjct 40668 CAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTAGAGTCGTCAGAC 40609 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| ||| |||||||| ||||| ||||||||||| || ||||| || Sbjct 40608 ACAATCGACAACGTTAAATCCAAGATTCAAGACAAGGAAGGAATCCCCCCAGACCAACAG 40549 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || ||||| ||||| ||| | || ||||| | || | |||| || ||| | Sbjct 40548 CGATTGATTTTCGCTGGAAAGCAGTTGGAGGATGGGCGCACGTTGTCCGACTACAACATT 40489 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || ||||| || || Sbjct 40488 CAAAAGGAGTCTACGCTGCACCTGGT 40463 Score = 122 bits (134), Expect = 2e-22 Identities = 131/172 (76%), Gaps = 6/172 (3%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCA 177999 |||| || || || ||||||||||||||||| ||| || |||||||| ||||||| Sbjct 41105 TCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGC---GATACCATCGACAACGTCA 41049 Query 178000 AACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCG 178059 | |||||||||||||| || || || ||||| ||||| || || || ||||| |||| Sbjct 41048 AGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAGCGTCTCATCTTTGCCG 40989 Query 178060 GAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 | || || || || ||||| |||||||| |||| || ||| | || || || Sbjct 40988 GCAAGCAACTTGAGGATGGCCGGACTCTTTCCGACTACAACATTCAGAAGGA 40937 >seq46 Length=8609 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 |||||||| ||||| || || || || |||||||| ||||| || ||| ||||| ||| Sbjct 2960 TTCGTGAAGACTCTGACTGGCAAGACCATCACCCTGGAGGTCGAGTCCTCGGACACGATC 2901 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || || || ||||| |||||||| || |||||||| || ||||| || || ||| Sbjct 2900 GACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAACAGCGTCTT 2841 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||| || || ||||| || || || | |||||| |||| || ||| |||| || Sbjct 2840 ATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGACTACAACATCCAGAA 2782 >seq1536 Length=70269 Score = 129 bits (142), Expect = 1e-24 Identities = 144/191 (75%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || ||||| || || ||||| || || || |||||||| |||||||| ||| Sbjct 29253 CAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC--- 29197 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || |||||||| || ||||| ||||| |||||||| || || ||||| ||||||||| Sbjct 29196 GATACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 29137 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || | ||||| ||||| || |||||||| || || ||||| || |||| || ||| Sbjct 29136 CAGCGCTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCAGGACCCTGTCCGACTACAAC 29077 Query 178101 GTCCAAAAAGA 178111 |||| || || Sbjct 29076 ATCCAGAAGGA 29066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203700662844120