Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734075.1_202014-07-28] 6,787 sequences; 38,048,501 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq4865 113 4e-20 seq1090 96.9 3e-15 >seq4865 Length=21582 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | ||||| ||| |||||||| ||||||| || || || Sbjct 10775 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 10716 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| || |||| | ||| ||||| || || || || ||||| Sbjct 10715 GACACAATCGACAACGTCA---AATCAAAGATTCAA-GACAAGGAGGGTATCCCGCCTGA 10660 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| || | || ||||| ||||| || | || |||| | || || ||||| Sbjct 10659 CCAACAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGAAGAACCCTGTCTGATTA 10600 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||| || || || || || || | ||||| Sbjct 10599 CAATATTCAGAAGGAGTCGACTCTGCACCTTGTGCT 10564 Score = 102 bits (112), Expect = 7e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| || || ||||||| | || || ||||| || Sbjct 11003 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 10944 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || || || ||| ||||| || || ||||| || |||| Sbjct 10943 GACACGATTGA--CAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACC 10886 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || || || || || || || |||| ||||| || ||| |||| Sbjct 10885 AACAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACA 10826 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || ||||| ||||| || || || || || || Sbjct 10825 ACATCCAAAAGGAATCTACTCTGCACTTGGTCCT 10792 >seq1090 Length=15806 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||||||||| || || ||||||| | || || ||||| || ||||| ||| Sbjct 9237 TTCGTGAAGACTTTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 9296 Query 25068 GAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || ||||| | || | ||| ||||| || || ||||| |||||||||||||| | Sbjct 9297 GACAATGTGAAGTCCAAGATTCA-GGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCT 9355 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 ||| ||||| ||||| || || || || | || ||| | ||| ||||| || || || Sbjct 9356 TATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAA 9415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433292156597405