Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734075.1_202014-07-28] 6,787 sequences; 38,048,501 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4769 100 6e-16 >seq4769 Length=8556 Score = 100 bits (110), Expect = 6e-16 Identities = 157/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| ||||| |||| ||||||||||| || |||| |||||||| || ||| Sbjct 7100 GGTGAGGACCTGTGCAACTGCACGTTCTCGCTCGCCTACGGTGCCAAGATTCTTCTCAAC 7041 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| ||| ||||||||||| | || || ||||| ||| ||||| || | Sbjct 7040 CAGACCCATCTCCGTCTCAAGCGTGGCCAGCGTTACGGTCTTTGCGGCCCCAACGGTTCC 6981 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| ||| || ||||||||||| |||| ||| | | ||| ||||| | ||| Sbjct 6980 GGAAAGTCCACCCTCATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 6922 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 ||||| | ||| || | || ||||||||| | ||||| Sbjct 6921 GAGCGAGGTCAAGACCGTCTTCGTCGAGCACGACCTTGACTC 6880 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | ||||| ||| ||||| | ||||||| ||||| || ||||| ||||| | Sbjct 5728 CCAACTTTGGTCTCGACGCCGAGCTGGTTTCTCACTCGCGCATGCGTGGTCTGTCTGGTG 5669 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 | ||| ||||| | ||| | | || |||| |||||| | |||||| |||||||| Sbjct 5668 GACAGCGTGTCAAGGTCGTCCTTGCCGCCTGCTC-GTGGCAGCGTCCTCACTTGATCGTT 5610 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || || |||||||||||||| ||||||| || Sbjct 5609 CTTGATGAGCCTACCAACTACTTGGACCGTGA 5578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027747420917867