Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734075.1_202014-07-28] 6,787 sequences; 38,048,501 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq6392 262 7e-65 seq6353 134 3e-26 >seq6392 Length=8221 Score = 262 bits (290), Expect = 7e-65 Identities = 840/1280 (66%), Gaps = 51/1280 (4%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 ||||| ||||||||||||||||||||||||||| |||||||||| || | ||||| || Sbjct 1881 GTCAGAGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGA-TCACGAGCCTCAGG 1939 Query 221476 AGAAGTGAAGGGCATACGCAG--CATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 ||| ||| |||| ||| || || ||||| |||| ||||| || || || || | | Sbjct 1940 AGACTCGAAAGGCAGACGGAGTGCAAG-GAAAG-CGTCAGCCAGACCTTGGACGCCCAGA 1997 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 ||||| |||||||| | | ||||| | ||| | || |||| ||||| || |||||| Sbjct 1998 CCGATAGGCCTGTGGCGCATGTTGCTGTTGCGTGC-CTCCTGG-ACGGGGTAGTAGTTGA 2055 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 | ||||| | ||||||||||| || | ||||| | ||||| || |||| Sbjct 2056 CTTCGATGATCTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCT--- 2112 Query 221652 GATTGAACACCAACTCGC---CGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAA 221708 | || ||| | || | |||| | || || || | || || | Sbjct 2113 ---------CAAAGTCGTATTCACCCTTGTGGTAG---TCGACGAACTGGGGCAGAGCCA 2160 Query 221709 CGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTAC 221768 | || ||||| || || || |||||||| | | |||| || ||||| || | Sbjct 2161 GGGAAGCAAGGTTGCATACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGC 2220 Query 221769 AGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG- 221827 |||||||| || ||||| || |||| || || || |||||| ||| ||| | Sbjct 2221 AGAGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGA 2279 Query 221828 TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAG 221887 |||||||| ||||| || || |||||||| ||||||| |||| || | ||| Sbjct 2280 TCCTTGTACAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAATACCAA 2339 Query 221888 AGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCT---CGGTCTTTTCATAC--CCGG 221942 |||| ||||| || || ||||| ||||| ||| || |||||| | Sbjct 2340 AGTT-TCTGGGCCTTGA--TCGTCTTGCG---ACCCTTACCGGCCTGCTCATACTTCTCA 2393 Query 221943 TATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGAC 222002 || ||||| | | |||| ||||||||| || | ||||| || ||| | || | Sbjct 2394 TACAGAGCCT--CGAACTCTTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGC 2451 Query 222003 ACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACA 222062 |||||| |||||| ||| | | || | || |||||| || || |||||||| | Sbjct 2452 ACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAA 2511 Query 222063 GCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122 | || | || || || | || || ||||||| |||| ||| ||||| || || | Sbjct 2512 GAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGA 2571 Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 ||||| || | || |||||||||||||| || |||| ||| | || ||||| |||| Sbjct 2572 GGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCT 2631 Query 222183 TGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCA 222242 ||||||||||||| || || | | |||||| | || || | || || | Sbjct 2632 TGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAA 2691 Query 222243 GTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGG 222302 ||||| || |||||||| || || || | || ||| | | | | | Sbjct 2692 TGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGA 2751 Query 222303 CAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362 | | |||||||| || || || ||||||||||| || ||||||| ||||| Sbjct 2752 CGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGT 2811 Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422 ||| ||||| || ||| ||||| | | | ||| || || ||||||| ||||| | Sbjct 2812 AGATTCCCTCAATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCT 2871 Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482 | | | |||||| || ||||| || ||||||||| ||| | |||||||| | Sbjct 2872 GCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAA 2931 Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCATGGCGCATCT 222540 | | ||| || || | ||||| | |||||||| ||| || | || || || | Sbjct 2932 GGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCAGATACCTACA--GCAACACG 2989 Query 222541 CATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGAT 222598 |||| ||||| ||| |||||||| ||| || | ||||| | ||||| || Sbjct 2990 CATGATCATGTGCTGTGGCCTCTCGACAATCTTGCCATTGAGCT--TCAATAGGTAAGAC 3047 Query 222599 TTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCG 222658 | || ||||||||||| || || || | | || || || | | ||| || | || Sbjct 3048 CTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGAAATCACGGTCGTAGACAATAGCT 3107 Query 222659 GCGTCCAGCTCCGACTTGTG 222678 | ||| || ||| |||||| Sbjct 3108 GAGTCGAGATCCTCCTTGTG 3127 Score = 93.3 bits (102), Expect = 8e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124 ||| ||||| | ||| ||||| ||| |||| |||||| || ||| || || Sbjct 1538 CATGTCGTCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACTAC 1597 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 ||||| || || | ||||| | | ||||| | ||| ||||| | || || | || Sbjct 1598 CTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCA 1657 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 |||||||||||| ||||| || | |||||| || || |||||||| || || |||| || Sbjct 1658 CTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCT 1717 Query 221245 GTTGCG 221250 |||||| Sbjct 1718 GTTGCG 1723 >seq6353 Length=8784 Score = 134 bits (148), Expect = 3e-26 Identities = 344/525 (66%), Gaps = 27/525 (5%) Strand=Plus/Minus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869 ||| ||||| | |||||| ||||| ||| |||||||| | | ||| | || Sbjct 1680 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACC 1621 Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929 |||| | ||| ||| | || || |||| || ||||| ||||| ||||||||| | ||| Sbjct 1620 TTTGCCACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTT 1561 Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGA 25988 || ||||||||||||||||| || || ||||| || ||| ||||| |||||||| Sbjct 1560 GCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTG-ACTTTCTCCAACGA 1502 Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCC- 26047 ||||||| | || |||||||| |||| || |||||||| || || | | || || Sbjct 1501 GCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCT 1442 Query 26048 -----ACTTGCTCCACAA--ACCTTCTCAA-GAGACCGTCTACAGTATCATCAAAGAGGC 26099 || || | |||| | || | || |||| || | || || || Sbjct 1441 GAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGT------TGTC------GATGC 1394 Query 26100 TGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAA 26159 ||| |||| ||| | ||||||| |||||||||| Sbjct 1393 TGTCAAGATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAA 1334 Query 26160 CAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGC-TGT-GCCAGCTG 26217 | || || |||| || |||||||||| ||| || ||| || | ||| ||| ||| Sbjct 1333 CGCCAACCTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCC--CTG 1276 Query 26218 GGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTG 26277 ||| || | ||||| || | | ||||| ||||| |||||||| ||||| || | Sbjct 1275 GGAAACGAGAAGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTC 1216 Query 26278 GAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 | || |||||||||||||| || || | || ||||| || ||| Sbjct 1215 GGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTACCAA 1171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928765999129280