Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734075.1_202014-07-28] 6,787 sequences; 38,048,501 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq6704 163 2e-35 seq4865 134 1e-26 seq1090 98.7 7e-16 >seq6704 Length=26799 Score = 163 bits (180), Expect = 2e-35 Identities = 179/234 (76%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||| ||||| || ||||||||||| ||||||||||| |||| Sbjct 12743 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 12684 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 || || || |||| || |||||||| |||||||||||||| |||||||| || | | Sbjct 12683 AG--GGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGG 12626 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||| ||||| ||| ||||| ||| || ||| | ||||||||| || || Sbjct 12625 GGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT--CGATGGTGTCGCTCGACTC 12568 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 |||||| | || || ||||| |||||||||||||| |||||||| |||||||| Sbjct 12567 CACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 12514 >seq4865 Length=21582 Score = 134 bits (148), Expect = 1e-26 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| || || ||||||||||||||||||||||| |||| || || |||| || Sbjct 11023 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 11082 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || || | || || || || | ||| | ||| ||||| ||| Sbjct 11083 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 11142 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | ||||| |||| ||| || ||||||| |||||||||| Sbjct 11143 ATCTTCGACTTTACATTGT--CGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCT 11200 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || |||||||| || ||||| || |||||| Sbjct 11201 TGCCAGTGAGGGTTTTGACGAAAATCTGCATG 11232 Score = 113 bits (124), Expect = 3e-20 Identities = 168/236 (71%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || |||| ||| || || ||||||||||||||||| Sbjct 10770 TTGCATACCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTA 10829 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||| || ||| | || |||| |||||| || || ||||||| ||||| || || Sbjct 10830 GTCGGACAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTC 10889 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282 | ||| | ||| ||||| || ||||| | || || || | || ||||| | | Sbjct 10890 CGGAGGAATACCCTCCTTGTCTTGGATCTT-GGATTTAACATTGTCAATCGTGTCTGAAG 10948 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || ||||||| ||| || ||||| ||||| | ||||| |||||||| |||||| Sbjct 10949 ACTCGACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 11004 Score = 105 bits (116), Expect = 5e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || |||||||| ||||||||||| |||| ||| || |||| || Sbjct 11250 CACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTC 11309 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| |||||||| || | |||||| || || | ||| | ||| ||||| ||| Sbjct 11310 GAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTG 11369 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| | | | ||||| ||| || |||||||| | || || ||||| Sbjct 11370 GATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTT 11429 Query 44308 TCCCGTGA 44315 || |||| Sbjct 11430 GCCAGTGA 11437 Score = 96.9 bits (106), Expect = 2e-15 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCG 44185 ||| ||||| || || |||||| || || |||||||| | || || || | || Sbjct 10566 CACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAG--GGTTCTTCCATCC 10623 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 ||||||||||| || |||||||||||||| || || || | || | ||| ||||| || Sbjct 10624 TCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGTCT 10683 Query 44246 GTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| || || | ||| | || ||||| | ||||| || || | || || || Sbjct 10684 TGAATCTT-TGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGT 10742 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || ||||| |||||||||||||| Sbjct 10743 TTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 10775 >seq1090 Length=15806 Score = 98.7 bits (108), Expect = 7e-16 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| |||| ||| || |||| |||| |||||| || ||||||| Sbjct 9417 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGA 9358 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 | | |||||| || || | || | || ||||| ||| ||||| ||||| | Sbjct 9357 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 9298 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | || ||||| | ||| || ||||||| || || ||||| || || | |||||||||| Sbjct 9297 CGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAAAGTCTTCACGA 9238 Query 44328 AG 44329 || Sbjct 9237 AG 9236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359960622831579