Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734085.1_202014-07-28] 8,396 sequences; 35,759,866 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3240 262 7e-65 seq373 134 3e-26 >seq3240 Length=8193 Score = 262 bits (290), Expect = 7e-65 Identities = 840/1280 (66%), Gaps = 51/1280 (4%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 ||||| ||||||||||||||||||||||||||| |||||||||| || | ||||| || Sbjct 6285 GTCAGAGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGA-TCACGAGCCTCAGG 6227 Query 221476 AGAAGTGAAGGGCATACGCAG--CATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 ||| ||| |||| ||| || || ||||| |||| ||||| || || || || | | Sbjct 6226 AGACTCGAAAGGCAGACGGAGTGCAAG-GAAAG-CGTCAGCCAGACCTTGGACGCCCAGA 6169 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 ||||| |||||||| | | ||||| | ||| | || |||| ||||| || |||||| Sbjct 6168 CCGATAGGCCTGTGGCGCATGTTGCTGTTGCGTGC-CTCCTGG-ACGGGGTAGTAGTTGA 6111 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 | ||||| | ||||||||||| || | ||||| | ||||| || |||| Sbjct 6110 CTTCGATGATCTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCT--- 6054 Query 221652 GATTGAACACCAACTCGC---CGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAA 221708 | || ||| | || | |||| | || || || | || || | Sbjct 6053 ---------CAAAGTCGTATTCACCCTTGTGGTAG---TCGACGAACTGGGGCAGAGCCA 6006 Query 221709 CGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTAC 221768 | || ||||| || || || |||||||| | | |||| || ||||| || | Sbjct 6005 GGGAAGCAAGGTTGCATACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGC 5946 Query 221769 AGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG- 221827 |||||||| || ||||| || |||| || || || |||||| ||| ||| | Sbjct 5945 AGAGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGA 5887 Query 221828 TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAG 221887 |||||||| ||||| || || |||||||| ||||||| |||| || | ||| Sbjct 5886 TCCTTGTACAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAATACCAA 5827 Query 221888 AGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCT---CGGTCTTTTCATAC--CCGG 221942 |||| ||||| || || ||||| ||||| ||| || |||||| | Sbjct 5826 AGTT-TCTGGGCCTTGA--TCGTCTTGCG---ACCCTTACCGGCCTGCTCATACTTCTCA 5773 Query 221943 TATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGAC 222002 || ||||| | | |||| ||||||||| || | ||||| || ||| | || | Sbjct 5772 TACAGAGCCT--CGAACTCTTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGC 5715 Query 222003 ACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACA 222062 |||||| |||||| ||| | | || | || |||||| || || |||||||| | Sbjct 5714 ACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAA 5655 Query 222063 GCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122 | || | || || || | || || ||||||| |||| ||| ||||| || || | Sbjct 5654 GAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGA 5595 Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 ||||| || | || |||||||||||||| || |||| ||| | || ||||| |||| Sbjct 5594 GGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCT 5535 Query 222183 TGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCA 222242 ||||||||||||| || || | | |||||| | || || | || || | Sbjct 5534 TGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAA 5475 Query 222243 GTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGG 222302 ||||| || |||||||| || || || | || ||| | | | | | Sbjct 5474 TGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGA 5415 Query 222303 CAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362 | | |||||||| || || || ||||||||||| || ||||||| ||||| Sbjct 5414 CGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGT 5355 Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422 ||| ||||| || ||| ||||| | | | ||| || || ||||||| ||||| | Sbjct 5354 AGATTCCCTCAATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCT 5295 Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482 | | | |||||| || ||||| || ||||||||| ||| | |||||||| | Sbjct 5294 GCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAA 5235 Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCATGGCGCATCT 222540 | | ||| || || | ||||| | |||||||| ||| || | || || || | Sbjct 5234 GGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCAGATACCTACA--GCAACACG 5177 Query 222541 CATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGAT 222598 |||| ||||| ||| |||||||| ||| || | ||||| | ||||| || Sbjct 5176 CATGATCATGTGCTGTGGCCTCTCGACAATCTTGCCATTGAGCT--TCAATAGGTAAGAC 5119 Query 222599 TTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCG 222658 | || ||||||||||| || || || | | || || || | | ||| || | || Sbjct 5118 CTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGAAATCACGGTCGTAGACAATAGCT 5059 Query 222659 GCGTCCAGCTCCGACTTGTG 222678 | ||| || ||| |||||| Sbjct 5058 GAGTCGAGATCCTCCTTGTG 5039 Score = 93.3 bits (102), Expect = 8e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124 ||| ||||| | ||| ||||| ||| |||| |||||| || ||| || || Sbjct 6628 CATGTCGTCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACTAC 6569 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 ||||| || || | ||||| | | ||||| | ||| ||||| | || || | || Sbjct 6568 CTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCA 6509 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 |||||||||||| ||||| || | |||||| || || |||||||| || || |||| || Sbjct 6508 CTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCT 6449 Query 221245 GTTGCG 221250 |||||| Sbjct 6448 GTTGCG 6443 >seq373 Length=8433 Score = 134 bits (148), Expect = 3e-26 Identities = 344/525 (66%), Gaps = 27/525 (5%) Strand=Plus/Minus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869 ||| ||||| | |||||| ||||| ||| |||||||| | | ||| | || Sbjct 1327 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACC 1268 Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929 |||| | ||| ||| | || || |||| || ||||| ||||| ||||||||| | ||| Sbjct 1267 TTTGCCACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTT 1208 Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGA 25988 || ||||||||||||||||| || || ||||| || ||| ||||| |||||||| Sbjct 1207 GCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTG-ACTTTCTCCAACGA 1149 Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCC- 26047 ||||||| | || |||||||| |||| || |||||||| || || | | || || Sbjct 1148 GCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCT 1089 Query 26048 -----ACTTGCTCCACAA--ACCTTCTCAA-GAGACCGTCTACAGTATCATCAAAGAGGC 26099 || || | |||| | || | || |||| || | || || || Sbjct 1088 GAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGT------TGTC------GATGC 1041 Query 26100 TGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAA 26159 ||| |||| ||| | ||||||| |||||||||| Sbjct 1040 TGTCAAGATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAA 981 Query 26160 CAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGC-TGT-GCCAGCTG 26217 | || || |||| || |||||||||| ||| || ||| || | ||| ||| ||| Sbjct 980 CGCCAACCTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCC--CTG 923 Query 26218 GGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTG 26277 ||| || | ||||| || | | ||||| ||||| |||||||| ||||| || | Sbjct 922 GGAAACGAGAAGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTC 863 Query 26278 GAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 | || |||||||||||||| || || | || ||||| || ||| Sbjct 862 GGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTACCAA 818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928747317738240