Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734085.1_202014-07-28] 8,396 sequences; 35,759,866 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq6413 102 1e-16 >seq6413 Length=7040 Score = 102 bits (112), Expect = 1e-16 Identities = 270/404 (67%), Gaps = 14/404 (3%) Strand=Plus/Plus Query 147106 ACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATG-GCGGGCAGGTCCGCGG 147163 ||||||||||| ||| | ||||||||||||||||| |||| || | |||||| || Sbjct 5946 ACGTAAAACTGCGCAAAC-ATGTGGCACGGCGGCAGGACCATAAGCTTG-AGGTCCTTGG 6003 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223 ||||||| || | |||| || | | | |||||| | | || | | Sbjct 6004 GGTTCCAAGCACTAAGAACCATGCGGCGGTCGTACGGGTTCGTGCGGAGCTTGTGCA--- 6060 Query 147224 CCCACCTC----AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTAC 147279 | ||||| |||||||| |||||||||||| ||||| || |||||| ||| Sbjct 6061 -CGACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTAT 6119 Query 147280 CTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTG 147339 ||| |||||||| | ||| ||||||||||| || || ||||||||||| || | | Sbjct 6120 TCGGCGCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGG 6179 Query 147340 TGCGAGAAGCCC-GCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCAC 147398 ||| || ||| ||||| | || ||||| || |||| | |||||||||| || Sbjct 6180 TGCTGCAATCCCAGCCCG-TCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGAC 6238 Query 147399 TCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTC 147458 || | || || ||| | ||| | |||| | |||||| |||||||| Sbjct 6239 CCCGGCGTCGCTCAGGGGCTTCGCCGACGTCGCGCCCGACACGAACCACAGCAGCTCGAG 6298 Query 147459 CAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 | || ||| | | ||||| | ||| || |||||||| |||| Sbjct 6299 GATCACGGCCCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGGGA 6342 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 |||| ||||| |||||| || | || | | ||||||| | || | || ||| Sbjct 5631 ATCTCGAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGCGTCGACG 5690 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 |||| | ||||||||| || || |||| | |||| | ||| ||| || || Sbjct 5691 TGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCACTAGACCC 5750 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 || | | || | ||||| || ||||| | ||||||||| ||||||||||| || || Sbjct 5751 GTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGGCACGCCT 5810 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 ||||||||||| | |||| |||||| |||||||| Sbjct 5811 AGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 5845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583426762934400