Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734095.1_202014-07-28]
5,680 sequences; 37,556,816 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq2201 82.4 6e-11
>seq2201
Length=48649
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891
||| | ||||| || |||||||| |||||||||||||| | || ||| | | |||||
Sbjct 7720 CACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCTTCCATCCTC 7661
Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951
|||||| || |||||| | || | | || || || || | ||||| |||||
Sbjct 7660 CAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTG 7601
Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011
||| || ||| || | | ||| || || || || ||||| || ||||||||
Sbjct 7600 AATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTT 7541
Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| || | || ||||| || ||||||||
Sbjct 7540 GCCGGTAAGCGTCTTGACGAAGATTTGCAT 7511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414544101197920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |