Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734105.1_202014-07-28] 7,899 sequences; 35,818,083 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq7483 136 6e-27 seq1908 127 3e-24 >seq7483 Length=8177 Score = 136 bits (150), Expect = 6e-27 Identities = 340/512 (66%), Gaps = 12/512 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || || | ||| ||||| | || || |||||||| || Sbjct 5513 CAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCGTGGCACGCAGAT 5572 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| | | || ||| || || ||| || ||| | ||| Sbjct 5573 GTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAGGAGGAGATTCGTGCCCGTGAC 5632 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 |||| || || ||| | || ||| |||||||||||||||| | | ||| || Sbjct 5633 CTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGCGTTGAGAAAAACGGCGAC 5692 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| | | |||||||| || || || || || | || |||| || |||||||| Sbjct 5693 TGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTCGCGGACTGCTACGGTGAAGAGTTC 5752 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATA-----CGTGAGACGAGTCGATG 97170 ||||| ||| | || ||||| ||||| || || |||||| || | | Sbjct 5753 GAGGCTCTGTATGAGAAGTATGAGCA----GGCCGGTAAGGGTCGCAAGACGA-TCAAGG 5807 Query 97171 CACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | | |||| ||| | ||||| || ||||||| |||||||| | |||| ||| | Sbjct 5808 CCCAGAAACTTTGGTATTCCATCCTGGAGGCTCAGACTGAGACTGGTAACCCGTTCATGC 5867 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCA-ACGCCACTTGGGCACCATCAAGGGC 97289 | ||||||||| | || ||||| |||||||| | | ||| || ||||| || Sbjct 5868 TGTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAATCTT-GGTACCATTCGCAGC 5926 Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTT 97349 ||||| || |||||||| ||| | |||||| | | || |||||| || || ||| Sbjct 5927 TCCAACCTCTGCACGGAGATTATCGAGTACTCTGCCCCTGACGAGGTTGCTGTATGCAAC 5986 Query 97350 CTGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 || || || | ||||||| |||| || || Sbjct 5987 CTTGCTTCCCTGGCTCTGCCCCAGTTCGTCGA 6018 >seq1908 Length=7852 Score = 127 bits (140), Expect = 3e-24 Identities = 203/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 ||| | |||||||| ||||| ||||||| || ||||||| ||||||| | ||| ||||| Sbjct 6719 TGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACGGCCGAAGAGATTGATTTGTCC 6778 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141 ||||| || |||| ||| | | | || || ||| | || || || ||| Sbjct 6779 AAGGATCTCCACGACTGGAACAACAAGCTCACAGATGATGAAAAGTACTTCATCTCACAC 6838 Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACGATT 125200 || | || ||||| |||| || ||||| ||||||||||| || || ||||| ||||| Sbjct 6839 ATCCTTGCATTCTTCGCCGCTTCTGATGGCATCGTCAACGAGAACCTCGTTGA-GCGATT 6897 Query 125201 C-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTG 125259 | | | ||| | ||||| |||| ||||| ||||| ||||| |||||||| | Sbjct 6898 CAGCGCCGAAGTCCA-GATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATGG 6956 Query 125260 AGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 ||||| | ||||| || | ||||| ||||| |||| |||||| Sbjct 6957 AGAACATTCACTCCGAGACTTACTCGCTCCTGATCGACACGTACAT 7002 Score = 127 bits (140), Expect = 3e-24 Identities = 347/529 (66%), Gaps = 17/529 (3%) Strand=Plus/Plus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || ||||| | |||| | |||||||| ||| | ||||| | | ||| Sbjct 7126 ATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACCTTTGCC 7185 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | ||| | || ||||| | ||| ||||| |||||||| ||| |||||| || Sbjct 7186 ACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCC 7245 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| |||||||||||||| || || ||||| || ||||| | |||||| | || Sbjct 7246 ATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTCATC 7305 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCG 125599 || || || ||||| |||||| ||||||||| ||| ||||| |||| Sbjct 7306 TCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGC----------- 7354 Query 125600 TCCCG-AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGA 125658 ||| | | ||| ||| | | || || | | ||||| |||||| || | || Sbjct 7355 TCCTGAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAGA 7414 Query 125659 TAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGC 125718 | || ||||||||||| || || | | || | | | | ||||||||| ||| | Sbjct 7415 TTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACC 7474 Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCA 125778 | ||| ||||||| |||||||| || || | || || || || | | Sbjct 7475 TGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTGGGAAACGAGA 7534 Query 125779 AGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGA 125838 || | ||| |||| || || || ||||| ||| | ||| ||||| | || |||| Sbjct 7535 AGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGCAAGA 7594 Query 125839 CCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885 ||||||| |||||||| || |||||||| ||| || ||||||| Sbjct 7595 CCAACTTCTTCGAGAAACGCGTTGGCGAGTACCAAAAAGC--CGGTGTC 7641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740986029667240