Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734105.1_202014-07-28] 7,899 sequences; 35,818,083 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq4932 102 7e-17 seq1471 89.7 4e-13 >seq4932 Length=26798 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTC 48576 || ||||| || |||||||||||||| |||||||| || | || || || ||||||| Sbjct 16224 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTC-GGAAAGGGTCCGACCGTCCTC 16282 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| || || |||| | || || || ||| || | || ||||||||| Sbjct 16283 AAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 16342 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || ||| ||| | | | |||||||||| ||||| ||| | || || || || Sbjct 16343 GATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTT 16402 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| ||||| || ||||||||||| Sbjct 16403 GCCAGTGAGGGTTTTGACGAAAATCTGCAT 16432 >seq1471 Length=26103 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTC--GCTCGTCCTCCAGCT 48581 || || ||||||||||| || |||||||| || | | | ||| || ||||||| |||| Sbjct 14033 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC-AGGGTCCTGC-CGTCCTCAAGCT 14090 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| ||| | | || || |||||||| ||| || | || ||||||||| || | Sbjct 14091 GCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCT 14150 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 | ||||| | | ||||| ||| | |||||| ||| | || || || || || | Sbjct 14151 TGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCG 14210 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 |||| || || || || |||||||| Sbjct 14211 TGAGGGTCTTGACGAAGATCTGCAT 14235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421210646541899