Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734105.1_202014-07-28] 7,899 sequences; 35,818,083 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq7483 168 1e-36 seq1908 141 1e-28 >seq7483 Length=8177 Score = 168 bits (186), Expect = 1e-36 Identities = 455/681 (67%), Gaps = 14/681 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCT-CAGATAGTACATGC 203897 || ||| || ||||||||||| | | |||| | ||||| || ||| |||||||||| Sbjct 6916 CTGGTCGACAGTGAACTGAATCGGCTGGGCGGCTG-CCTGCGTCCGCAGGTAGTACATGC 6858 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 ||||||| || || || ||| ||| | ||||| || | | |||| || | | | Sbjct 6857 CGGTCTTGAGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCG 6798 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 ||||| |||||| ||||| || |||||| ||||| ||| ||||| || || || ||| Sbjct 6797 GGTCGCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATG-AAGGCACCACGGTCAGCG 6739 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075 ||||| | | | ||| ||||| |||||||| || |||||| | | | ||| |||| Sbjct 6738 GCCATCTGAACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCT-TGGT 6680 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 | | ||| | || | | || || ||| ||||| ||||| || | | || Sbjct 6679 ATCCTCAGGGA-TGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCT 6621 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | || || ||||| | |||| || || ||| ||| | || |||||||| Sbjct 6620 TCATGTCGTCTGACCACA-GACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACT 6562 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || |||| ||||| | || | | | |||| || | || || || Sbjct 6561 ACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAG 6502 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 |||||||||||| | || || | ||||| || || |||||||| || | ||||| | Sbjct 6501 CACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAG 6442 Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373 |||||| ||||| | || | || || ||| |||| | |||||| || | Sbjct 6441 CTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTC--CCAGAGGT 6384 Query 204374 CTG--GGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCT 204431 ||| || || ||| |||||||||| |||| | || || || || || |||| Sbjct 6383 CTGAAGGCTTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCT 6324 Query 204432 TGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491 ||| |||| || || | ||| ||||| |||||||| ||||| | || || | Sbjct 6323 CGTATGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTCAGAGCAGCGT 6264 Query 204492 AGTACATGGTCTCAAAGATCT 204512 ||| |||||||||||||||| Sbjct 6263 GGTAGATGGTCTCAAAGATCT 6243 Score = 104 bits (114), Expect = 4e-17 Identities = 439/681 (64%), Gaps = 28/681 (4%) Strand=Plus/Minus Query 204928 ATGCTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTT 204987 || || |||||| ||||||||| ||| |||||||||| ||||||||| | || | Sbjct 5908 ATTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGT 5849 Query 204988 CTCCATCTGAGATCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCA 205043 ||| |||||| ||| ||| ||| | || | |||| | ||||| | Sbjct 5848 CTCAGTCTGAGCCTCCAGGATGGAATACCAAAGTTTCTGGGCCTTGATCGTCTTGCGACC 5789 Query 205044 CGTACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGT 205103 | ||| ||| ||| || || ||||| ||| | || || |||||| || Sbjct 5788 CTTACCGGCCTG----CTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAGCAGT 5733 Query 205104 CCATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTC---A 205160 || || || || || | || || ||||||| | ||| | ||| |||| | Sbjct 5732 CCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAG---TCGCCGTTTTTCTCAA 5676 Query 205161 CCCTCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTC 205220 | | || ||| ||||| || |||||| || || ||||| |||||||| | ||| Sbjct 5675 CGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCT 5616 Query 205221 CGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGC 205279 | || | ||| ||||||| | | ||| || || || | | || |||||||||||| Sbjct 5615 CCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGG-AACTCGAAGACATCTGCGTGCCACGGC 5557 Query 205280 TCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTC 205339 || | | | ||| | || || || | |||||| ||||||||||| || ||||| Sbjct 5556 TCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCT 5497 Query 205340 ATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTG 205399 | |||||| || |||||||| || || | ||||| | ||| ||||| || | | | Sbjct 5496 GTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCG 5437 Query 205400 ATGGCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCG----CGCCAATCCCGCCAGAACA 205455 || |||| ||| |||| | ||||| || || || ||||||| Sbjct 5436 ATATAGGAGC---CAG-TGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAGCCAT 5381 Query 205456 CTTGGCGATCTGGGCGC-ACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCG 205514 ||||| |||| ||| | | ||||| || ||| |||||| || | ||| |||||| Sbjct 5380 CTTGGAGATCATGGCACAAGTCTTG-AGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCT 5322 Query 205515 CCAGTGTC-ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGC 205573 || | || ||||| |||| || | || || || ||||| |||| ||| ||| Sbjct 5321 TCA-TATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGC 5263 Query 205574 GTGGGGCTGGCGTGGCTGAAG 205594 || ||| |||||| ||||| Sbjct 5262 GTCGGGGAGGCGTGTGTGAAG 5242 >seq1908 Length=7852 Score = 141 bits (156), Expect = 1e-28 Identities = 332/498 (67%), Gaps = 11/498 (2%) Strand=Plus/Minus Query 159650 TTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTC 159709 |||||||| |||||||||||||| | | || || ||||| || |||||||||| Sbjct 7610 TTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCCATAAAATCGAATGGGTTG 7551 Query 159710 TTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCG 159769 | | | ||| |||| ||| || || | || | ||||| || ||||| || Sbjct 7550 GTGGCACGGTAGACCTTCTCGTTTCCCAGGGCGACAAGAAGTCTGTCAGCGACAAACTCA 7491 Query 159770 ATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 ||||| || | |||| | | ||| || ||||| || ||| | ||| |||| Sbjct 7490 ATGTA-CTGCTTCATCAGGTTGGCGTTCATGCCCAGGAGGGCGCAGGGCAACGCCTCCGT 7432 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCC 159888 |||||||| | |||||||| ||| || ||| ||||||| | ||| || | Sbjct 7431 AAGAAACTCTTGCTCAATCTTGACAGCATCGACAACAATCTCCTTCACAACCTCCTTGTT 7372 Query 159889 CGGCTTGCCCAAAATGT---GGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 ||| || ||| || | |||||||| || ||||||||| ||| || || Sbjct 7371 GGGCCTGT------TGTTCAGGAGCGAGAACAGGAGACAGGCAAAGTCGGTGTGTAGACC 7318 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 ||| || || ||||||| ||||||||| | | || || ||||| | |||||| || Sbjct 7317 CTCATCACGCGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGGCCACGCTTCTT 7258 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 |||||| || |||| |||||||||||||| || ||||| ||||| ||| | || || || Sbjct 7257 GAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAAGATACCCTCGACGACAGCGAAAGC 7198 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 | || | | |||| | | || |||| | ||||||| ||||| || || Sbjct 7197 GATCAGGCGCGTGGCAAAGGTTGACTTCTTGTCGGTGATCCACCTCAGAGCCCAGTCGGC 7138 Query 160126 CTTCTTTGCGATGCACGG 160143 |||||| |||||| || Sbjct 7137 CTTCTTGCGGATGCAGGG 7120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795076688363440