Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734155.1_202014-07-28] 8,416 sequences; 36,260,258 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq5375 295 7e-75 >seq5375 Length=4682 Score = 295 bits (326), Expect = 7e-75 Identities = 981/1503 (65%), Gaps = 56/1503 (4%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| ||||||| || |||||||| || || ||| | | ||| |||| || || |||||| Sbjct 1748 GCCTCCCCGACGCTTTTCAACGCCGGCACACCGCAGGCTCAGTTGTCGTCATGCTTCCTG 1807 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | |||| |||| ||| ||||| | ||||| ||||||| ||||| | Sbjct 1808 GTTGATATGAAGGACGACAGCATTGAGGGAATCTACGACACCCTCAAGACTTGTGCCATG 1867 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||| || || || || ||||| ||| ||||| | | ||||||| || ||| Sbjct 1868 ATCTCCAAGATGGCTGGCGGTATCGGTCTCAACGTCCATCGCATCCGTGCCACTGGCTCC 1927 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 || ||| ||||||||| |||||||| |||||| | || || ||||| || || |||||| Sbjct 1928 TATATCGCCGGTACCAACGGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAAC 1987 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || |||||||| ||||||||||| | | | ||| | || || |||| Sbjct 1988 AACACAGCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTAC 2047 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || ||||| |||||||| || || | ||| ||||||| | ||||||||||| || Sbjct 2048 CTTGAGCCGTGGCACGCAGATGTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAG 2107 Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || ||||| | ||| | ||||| ||| |||||| ||| | || || || || ||| Sbjct 2108 GA---GGAGATTCGTGCCCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATG 2164 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368 || ||||| ||||||||| || ||||| | | || || || || || || || || Sbjct 2165 AAGCGCGTTGAGAAAAACGGCGACTGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTC 2224 Query 94369 TCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-----AT-CGCAG 94422 | ||| || || |||||| || | |||| || || || |||| Sbjct 2225 GCGGAC-----TGCTACG----GTGAAGAGTTCGAGGCTCTGTATGAGAAGTATGAGCAG 2275 Query 94423 ---GGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTA 94479 || |||| | ||| || | || ||| || ||| || ||| |||| | Sbjct 2276 GCCGGTAAGGGTCGCAAGACGATCAAGGCCCAGAAACTTTGGTATTCCATCCTGGAGGCT 2335 Query 94480 CAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAA 94538 ||| ||||| |||| || | ||| ||| |||||| | ||| |||| |||| ||| Sbjct 2336 CAGACTGAGACTGGTAACCCGTTCATGCTGTACAAGGATCACTG-CAACCGCAAGAGCAA 2394 Query 94539 CCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATAC 94598 |||| || |||| || || ||||| || || ||||| |||||| ||||||| | Sbjct 2395 CCAGAAGAACCTTGGTACCATTCGCAGCTCCAACCTCTGCACGGAGATTATCGAGTACTC 2454 Query 94599 TTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCG 94658 | | || |||||| ||||||| || ||||| | ||| | ||| || ||||| || Sbjct 2455 TGCCCCTGACGAGGTTGCTGTATGCAACCTTGCTTCCCTGGCTCTGCCCCAGTTCGT-CG 2513 Query 94659 AGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAG 94718 | | || ||| | | | | ||| | ||| | || | || | ||| Sbjct 2514 A-CTACC-ACAAG------GGTGAATACGACTTTGAGAAACTCCATGAGGTCAC-TCAAG 2564 Query 94719 --GATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCG 94776 | || || ||||| |||| | | ||||| |||| ||||||||||| |||||| Sbjct 2565 TCGTTGTTC-GCAACCTCAACAAGATCATCGAAGTCAACTACTACCCCGTCCAGGAGGCA 2623 Query 94777 GAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836 ||| ||| || || |||| ||||| | |||||||| ||| | || ||||| Sbjct 2624 CGCAACAGCAACATGCGCCACAGGCCTATCGGTCTGGGCGTCCAAGGTCTGGCTGACGCT 2683 Query 94837 CTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATA 94896 | | | |||||||| | ||| ||| || || | | | || ||| || Sbjct 2684 TTCCTTGCACTCCGTCTGCCTTTCGAGTCTCCTGAGGCTCGTGATCTCAACAAGAAGATC 2743 Query 94897 TTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCA-CTTGGCCAGATCGGACGG 94955 || || | ||| || ||| || ||| || | | |||| |||| ||| Sbjct 2744 TTTGAGACCATCTACCACGCTGCTCTGACTGCCTCTTGCAAGCTTG--CAGA--GGAGCA 2799 Query 94956 CGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCT 95015 || ||| || | | | ||||| || | |||||| ||| | |||| |||| | Sbjct 2800 GGGTCCATACTCGACATACGAGGGATCTCCTGTTTCACAGGGAATTCTCCAGTACGACAT 2859 Query 95016 CTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAA 95075 ||| || ||||| || | || | |||||||| ||||| || | | | | Sbjct 2860 GTGGAACGTCAAGCCTTCAGACCTCTGGGACTGGGACGCTCTCAAGGCCAACATCAAGCA 2919 Query 95076 ACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGAT 95135 ||| ||||| ||| |||| || ||||||||||| || || |||| | || || Sbjct 2920 ACATGGTGTCCGCAACAGCTTGCTCGTTGCCCCCATGCCTACAGCTAGCACGTCACAAAT 2979 Query 95136 CCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCT 95195 ||||||||||||||||| || || |||| || |||||| | ||| | | || ||||| Sbjct 2980 CCTTGGCAACAACGAGTGCTTTGAGCCCTATACTTCCAACATTTACCAACGCCGTGTGCT 3039 Query 95196 CGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGT 95253 ||||| || |||| || ||||| | || ||| ||| ||| || ||| Sbjct 3040 TGCCGGCGAGTTCCAGGTAGTCAACCCCTGGTTGCTCAAGGATCTG--GTCGAGCTTGGT 3097 Query 95254 GTGTGGGGTGACAAGGTCAAGAACC--AACTGCTACGCGCCAACGGCTCCGTCCAGAACA 95311 ||||| ||| | | ||||||| | | | || | | |||||| ||||||||| Sbjct 3098 CTGTGGTCAGACGACATGAAGAACCGTATCATCGCCGAGGGA--GGCTCCATCCAGAACA 3155 Query 95312 T--CCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCA 95369 | || || || || ||||| | |||| |||||||||||| || ||||||||| |||| Sbjct 3156 TTGCCAGC--ATCCCTGAGGATACCAAGAAGCTCTACAAGACTGTTTGGGAGATCTCGCA 3213 Query 95370 GCG 95372 || Sbjct 3214 ACG 3216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494671155119360