Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734155.1_202014-07-28] 8,416 sequences; 36,260,258 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5375 167 3e-36 >seq5375 Length=4682 Score = 167 bits (184), Expect = 3e-36 Identities = 410/614 (67%), Gaps = 22/614 (4%) Strand=Plus/Minus Query 117805 TGAACTGAATGGGTCT---CGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGA 117861 |||||||||| || || || || |||| | || ||||||||||| || ||||||| Sbjct 3401 TGAACTGAATCGG-CTGGGCGGCT--GCCTGCGTCCGCAGGTAGTACATGCCGGTCTTGA 3345 Query 117862 GCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCA 117921 | || |||||||| | | |||||| |||| | |||| | ||| || || Sbjct 3344 GACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGGGTCGCGCA 3285 Query 117922 TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAA 117981 || || ||| | ||||| || || |||||| || || || || ||||| | || Sbjct 3284 TGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGAA 3225 Query 117982 TCACA-TCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGG 118040 || | | | | ||| ||||| |||||| ||||||| ||||| |||| || ||| Sbjct 3224 CGACGGTACGTTG-CGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATCCTCAGGG 3166 Query 118041 ATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 118100 || | || || |||||||| || ||| | || || | | |||||| || | | Sbjct 3165 ATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTTCATGTCGTCT 3106 Query 118101 GACCAGAGACCAATCTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAA 118156 ||||| ||||||| || ||||||| | || || | ||||| || || Sbjct 3105 GACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGG----TTGACTACCTGGAA 3050 Query 118157 CTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATT 118216 ||| || || || || | | || || |||| || || |||||||||||||| || Sbjct 3049 CTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACTCGTT 2990 Query 118217 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 118276 ||| || | |||||| | ||| ||||| |||||||| || | ||| | |||||| || Sbjct 2989 GTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGTTGCG 2930 Query 118277 GAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTT---GT 118333 || ||| | || | | ||| ||||||||||||||||||| | ||| | | | Sbjct 2929 GACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCA---GAGGTCTGAAGG 2873 Query 118334 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 118393 || | | |||||| || ||||||| || || || || | || |||||||| |||| Sbjct 2872 CTTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCTCGTATGT 2813 Query 118394 CTCATATGGGCCCT 118407 | ||||| |||| Sbjct 2812 CGAGTATGGACCCT 2799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618370140616960