Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734165.1_202014-07-28] 8,275 sequences; 36,036,965 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3965 264 1e-65 seq6419 122 1e-22 >seq3965 Length=9609 Score = 264 bits (292), Expect = 1e-65 Identities = 435/626 (69%), Gaps = 6/626 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 5927 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCC 5868 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | ||| ||||| || ||||||||||| || || ||||| || ||| Sbjct 5867 TCCTCAATGGTAAGGAGCGACACATCGAAAGTACCACCACCAAGATCGAAAATAAGCACG 5808 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || ||||| || |||||||| ||||| || || || || || || Sbjct 5807 TTGCGCTCACCCTCGACCTTCTTGTCAAGACCGTAGGCGATGGCGGCGGCAGTAGGCTCG 5748 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || |||||| |||||||| | ||||| || || || || || Sbjct 5747 TTGATGATACGGAGGACGTTCAGACCAGCAATGAGACCGGCATCCTTGGTAGCCTGACGC 5688 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||| |||||||| ||||| || ||||| |||| |||| | ||| || Sbjct 5687 TGCGAGTCGTTGAAGTAGGCGGGGACGGTGACGACAGCGTTGTTGACGGTGCCACCAAGG 5628 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || || | || ||| ||||| | ||||| ||||| ||||| |||| | Sbjct 5627 TAAGACTCAGCAGTCTCACGCATCTTGGTCAAGACCATGGATGAGATCTCCTCAGGAGTG 5568 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| || | || || || || || || ||||| | || || ||| | | Sbjct 5567 AACTGCTTTGACTCTCCCTTGAACTCGACCTCAATGACAGGCTT---GCCAGACCTCTCG 5511 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | ||||| | | | | ||||| ||| | ||||||| ||| || ||||| | Sbjct 5510 ACGACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCGTCGGAGAACTTGCGA 5451 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || | | ||| || || || || ||||| | ||||||||| || |||||||| Sbjct 5450 CCAATCAACCTCTTCGCGTCGAAGACGGTGTTGTGGGGGTTCATAGCGACCTGGTTCTTG 5391 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 ||||| || ||||| ||||| || || ||||| ||||| ||| | || ||||| ||| Sbjct 5390 GCCGCATCTCCGATCAGACGCTCGGTA---TCCGTGAACGCCACGAAGGACGGGGTTGTT 5334 Query 8057 CGATTCCCTTGGTCGTTCGCAATAAT 8082 || || || ||||| || || ||||| Sbjct 5333 CGGTTACCCTGGTCATTGGCGATAAT 5308 >seq6419 Length=12940 Score = 122 bits (134), Expect = 1e-22 Identities = 324/492 (66%), Gaps = 6/492 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | ||| || || || ||||| || ||| || || | ||| Sbjct 2000 TCGAAATCCTCACCACCAAGGTGGGTGTCACCGGCGGTGGCCAGGACCTCGAAAACACCG 1941 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | ||||| || || || |||||||||||||| | | || | Sbjct 1940 TTGTCGATCGAAAGGAGGGAAACGTCGAAGGTGCCACCACCCAGGTCGTACACGATGATC 1881 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | | || ||| | | |||| || || |||||||| | ||| || ||||| || || Sbjct 1880 TGGTTCTCCTCGCC---GGTCTTGTCCAGGCCGTACGCCAAAGCGGCAGCCGTGGGCTCG 1824 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 |||| |||||||||| ||| || || |||||| | || || || ||||| || | Sbjct 1823 TTAACAATACGAAGAACGTTGAGACCGGCAATAACACCGGCGTCCTTTGTCGCCTGCCTC 1764 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || ||||| ||||| || || || || ||||| |||| || || ||||| || | Sbjct 1763 TGGTTGTCGTTGAAGTACGCGGGAACGGTGACGACGGCGTGGGTAACCTTCTTGCCCAAG 1704 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || || | || ||||| ||| | | ||| | || | ||| || | | Sbjct 1703 TAGGCCTCGGCAACCTCCTTCATCTTGCCCAAGATCATGGCCGAGACCTCCTCGGGGGTG 1644 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| || || ||||| || | ||| || || | ||| || ||| | | | Sbjct 1643 AACTGCTTGGTCTCACCCTTGACATCGACCGAAACAACGGGCTT-TCCTC--CCTTGTTC 1587 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | |||||| || | | | || ||||| | ||||| | | ||||| |||||| | Sbjct 1586 ACAACCTTGTAGGGGAAGTGCTTGATATCTTGCTGGACATCCTTGTCCGTAAACTTGCGA 1527 Query 7937 CCGATAAGACGC 7948 |||||||||||| Sbjct 1526 CCGATAAGACGC 1515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635067103451000