Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734185.1_202014-07-28] 8,248 sequences; 36,211,322 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq4671 170 4e-37 seq339 152 9e-32 seq5043 129 1e-24 seq852 127 4e-24 seq8038 89.7 9e-13 >seq4671 Length=14982 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| || || || || ||||||||||| || ||||| Sbjct 10806 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 10747 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| || ||||| || |||| |||||||| || ||| Sbjct 10746 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 10687 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| | || || || || ||||||| || || || Sbjct 10686 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACC 10627 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || ||||| | ||||||||||| |||||||| Sbjct 10626 TCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 10580 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || || ||||| || || || || ||||| || Sbjct 11034 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 10975 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || || ||||| || | |||||| || || || || | | ||||||||| || || Sbjct 10974 AGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 10915 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||||| |||||| ||||| ||||||| ||||| ||| Sbjct 10914 ATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACT 10855 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||||| || || || ||||||||||| || ||||| Sbjct 10854 TCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 10808 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||| || || ||| ||| ||||||||||| || ||||| Sbjct 10578 CCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 10519 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || || || | |||||| || ||||| || || | ||||||||| || ||| Sbjct 10518 AGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGA 10459 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||| || |||||||| || | || || || Sbjct 10458 ATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACC 10399 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || || || || |||||||| |||||||| |||||||| Sbjct 10398 TCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 10352 >seq339 Length=26068 Score = 152 bits (168), Expect = 9e-32 Identities = 174/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| || | ||| || ||| ||| || |||||||| || ||||| Sbjct 13972 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 14031 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||| || || || | |||||| ||||| || || | | || ||||| || || Sbjct 14032 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 14091 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || ||||| | |||||| ||||||||||| ||| || || || Sbjct 14092 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTC-GCTCGACTCCAC 14150 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || | |||||| || || |||||||||||||||||||| |||||||| || Sbjct 14151 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 14201 >seq5043 Length=12173 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || |||||||| || | || || || |||||||| || || || || Sbjct 6359 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 6418 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | |||||||| || ||||| || |||||||| |||||||| | ||| || ||| Sbjct 6419 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 6478 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || |||||||||||||| || || || || ||||| ||||| Sbjct 6479 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 6537 >seq852 Length=15168 Score = 127 bits (140), Expect = 4e-24 Identities = 662/1041 (64%), Gaps = 48/1041 (5%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | || || |||||| |||||| || || ||| |||||| Sbjct 11329 CGCCACTGGATGTACTCGGAAGGAGTGCTGTCCAAGTGGTTGTCGATGTGGGCGAAAGCG 11270 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| | ||| || || || ||||| |||| | | || ||| || Sbjct 11269 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCAGCAGTGGGG 11210 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 ||| || || ||||| |||||||| |||| ||| || ||||| ||||| ||||| Sbjct 11209 ATAAGCTCACCAGTCAGGACGTTGATGAGAGTAGACTTTCCGGCACCGTTGGGACCAATG 11150 Query 225161 ACGCCAATCCGGGATG--ACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGGC 225218 ||| |||| ||||| | | ||| ||| || | | || ||||| || ||| Sbjct 11149 ACGGCAATACGGGAACCAAGAGAGCA--CTGGAAGGTGATGTCGCTGA-----TCTGGGG 11097 Query 225219 CAGTTTGGTAAGCAAAGGCCACGCCAC--GCAG--CTTCATGATGGCACGGT-------- 225266 | |||| || | ||| | || | || | || || |||||||| Sbjct 11096 C---TTGG--AGGTA---CCAGGGTACTGGAAGTCCATCTTGGTGGCACGGAGAATGGCC 11045 Query 225267 ----CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACC 225322 |||||| | | |||||| ||||| |||||||||||||| ||| || | Sbjct 11044 TTGGCCTTGGTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAAGGTGAACTCCATCTCA 10985 Query 225323 GCGTCCTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGG 225382 | | | || ||||||||||| ||| ||| | ||| ||||| | |||| Sbjct 10984 GAGGCACCGAGCTCGTAGTAAGACTTGGCCGAGGGGCACTTCTTGACGAACTCCTTCAGG 10925 Query 225383 TTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACAC 225441 || || ||| | ||||||||| || |||| ||||| || ||| | ||| || Sbjct 10924 TTACCACGGTAACGCTTGAGCTTGAAACGCT---CGTAGTGAACGATGTGCTG-GCAGAC 10869 Query 225442 TGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCT 225500 ||| ||||||| |||||||| ||||| |||||||| | || | | || | | Sbjct 10868 GTTGTCGAGGAAGCTGGAGTCGTGCGACACGATGATGGAGGTGCAAG---GGGAGTTC-T 10813 Query 225501 TGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCA 225560 ||||| | ||||| ||||| | ||||||| |||||| || || ||||| | Sbjct 10812 GGAGGTACTCCTCAAGCCACTTGACGTTCTTCACGTCCAAGTGGTTGGTGGGCTCGTCGA 10753 Query 225561 GAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGC 225620 | | ||| || |||| | | || || ||| || |||| ||||||||| ||||| | Sbjct 10752 GCAACAGAATATCAGGAGCCTCGAAGACGGCACGGCACAGAGCCAGCTTCATCTTCCAAC 10693 Query 225621 CCCCGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGA 225680 | ||||| || | | ||| | |||| | | | ||| || ||| |||| || Sbjct 10692 CACCGGAAAGAGCGGTGATCTCACCAGAAACCATGGAGTCGGTGAAACCGAACTCGTTGA 10633 Query 225681 GCGTCTGGATAATGCGCTCGGGAG-AGCTGCGAGC--GGCAACGTTGGGGTCGGACGAGA 225737 | || || | | |||| | | | | | || | ||| | | | | | | Sbjct 10632 GGCGCTTGACGACGTCCTCGCGGGTAACCGAGACCTTGGCCTCCTCCAGCTTCTTCATGG 10573 Query 225738 GGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCG 225797 | || |||||| || | | ||| | ||||| |||||| || ||| | || | Sbjct 10572 TCCAGTCGATGGTGGTCATCTCAGTGTCAGCAGAGTCAAGGTCGTGCTCGACGAAGACGG 10513 Query 225798 TCCGGAGCT-GAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGC 225856 || || || | || | |||||| ||||| | ||| | || || || || | Sbjct 10512 TCTTGACCTCGCTCTGCTT-GGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATG 10454 Query 225857 AGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATG 225916 ||||| ||| || | |||||||| ||| || |||||| | | || ||||||| Sbjct 10453 AGGGTGGACTTTCCGGAACCGTTGGGGCCGCAAAGACCGTAACGCTGGCCACGCTTGAGA 10394 Query 225917 TTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCG 225976 ||| | || ||| || || |||||| |||| ||||| || |||||| ||| | | Sbjct 10393 CGGAGATGGGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCGAGCGAGAACGTGCAGTTG 10334 Query 225977 CACAGGTCCTCACCCTCCTCG 225997 ||||||||||||||||||||| Sbjct 10333 CACAGGTCCTCACCCTCCTCG 10313 >seq8038 Length=5688 Score = 89.7 bits (98), Expect = 9e-13 Identities = 259/394 (66%), Gaps = 10/394 (3%) Strand=Plus/Plus Query 176892 ACAATTGGAGTCACGAAGCGCTTGAGGAACCCGGGGATCTCGAGCAGCGACGGGAACTGT 176951 |||| ||||| | ||| || || ||| ||||||||| ||||| || |||||||| Sbjct 3402 ACAACCGGAGTGATGAACTCCTGGAAGAAGTCGGGGATCTGCAGCAGAGAAGGGAACTGC 3461 Query 176952 GCATGGAAAAAGTTCAGCACTAGACCAGCAATATGTGAGCCGTCAACGTCCTGGTCTGCC 177011 | |||| ||||| | | ||||| ||||| ||||| ||||| || ||| Sbjct 3462 ACTTGGAGGAAGTTTATGAGAAGACCCTTGATATGACTTCCGTCGTGATCCTGATCAGCC 3521 Query 177012 ATAATAATCACAGACCCGTACCGAAGAGAGGACGCGTCCTTGTAGTTCACACCATTGCG- 177070 || || |||| | || || |||||| | ||| |||| | ||| ||| | Sbjct 3522 ATGATCATCAGATGACCATATCGAAGACCCTTGGTGTC--TGTA-TACACCTGTTTGTGT 3578 Query 177071 --GAGACCGAGAATTTGTTTGATGGCAGTAATCTCGGCGTTGTTAGTAATACTAGACACA 177128 |||||| || | |||||||| ||||| ||| || || | | Sbjct 3579 TTGAGACCCAGGAACTGTTTGATATTTTGGATCTCCTTGTTCTTCAGGATCTGATCTATG 3638 Query 177129 GACGCATCACGGACATTCAGTAGCTTACCACGGAGGGGGAAAATTCCGTAGCGATCCCGA 177188 || ||||| || |||||||| | |||||| | ||||||||| | ||| ||| || || Sbjct 3639 GATGCATCTCGCACATTCAGCATCTTACCCCTGAGGGGGAACACGCCGATGCGGTCTGGA 3698 Query 177189 CCCACGACAGCAAGGCCAGCTGTGGCAAGCGTGGCGGCAGAGTCACCCTCTGTCAAAATG 177248 ||| || ||| ||||||| || || ||||||||||||||| ||||| | Sbjct 3699 TCCAGGATGGCACGGCCAGCAACCGCCAGACCACGGGCAGAGTCACCCTCAGTCAACACT 3758 Query 177249 AGCGTGCACATTCCAGA--GTGCTTCGTGCCCGC 177280 ||||||||| || || |||||||||||| || Sbjct 3759 AGCGTGCAC--TCATGACCGTGCTTCGTGCCTGC 3790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921527380730560