Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734185.1_202014-07-28] 8,248 sequences; 36,211,322 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3819 262 7e-65 seq780 134 3e-26 >seq3819 Length=8217 Score = 262 bits (290), Expect = 7e-65 Identities = 840/1280 (66%), Gaps = 51/1280 (4%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 ||||| ||||||||||||||||||||||||||| |||||||||| || | ||||| || Sbjct 6307 GTCAGAGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGA-TCACGAGCCTCAGG 6249 Query 221476 AGAAGTGAAGGGCATACGCAG--CATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 ||| ||| |||| ||| || || ||||| |||| ||||| || || || || | | Sbjct 6248 AGACTCGAAAGGCAGACGGAGTGCAAG-GAAAG-CGTCAGCCAGACCTTGGACGCCCAGA 6191 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 ||||| |||||||| | | ||||| | ||| | || |||| ||||| || |||||| Sbjct 6190 CCGATAGGCCTGTGGCGCATGTTGCTGTTGCGTGC-CTCCTGG-ACGGGGTAGTAGTTGA 6133 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 | ||||| | ||||||||||| || | ||||| | ||||| || |||| Sbjct 6132 CTTCGATGATCTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCT--- 6076 Query 221652 GATTGAACACCAACTCGC---CGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAA 221708 | || ||| | || | |||| | || || || | || || | Sbjct 6075 ---------CAAAGTCGTATTCACCCTTGTGGTAG---TCGACGAACTGGGGCAGAGCCA 6028 Query 221709 CGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTAC 221768 | || ||||| || || || |||||||| | | |||| || ||||| || | Sbjct 6027 GGGAAGCAAGGTTGCATACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGC 5968 Query 221769 AGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG- 221827 |||||||| || ||||| || |||| || || || |||||| ||| ||| | Sbjct 5967 AGAGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGA 5909 Query 221828 TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAG 221887 |||||||| ||||| || || |||||||| ||||||| |||| || | ||| Sbjct 5908 TCCTTGTACAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAATACCAA 5849 Query 221888 AGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCT---CGGTCTTTTCATAC--CCGG 221942 |||| ||||| || || ||||| ||||| ||| || |||||| | Sbjct 5848 AGTT-TCTGGGCCTTGA--TCGTCTTGCG---ACCCTTACCGGCCTGCTCATACTTCTCA 5795 Query 221943 TATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGAC 222002 || ||||| | | |||| ||||||||| || | ||||| || ||| | || | Sbjct 5794 TACAGAGCCT--CGAACTCTTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGC 5737 Query 222003 ACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACA 222062 |||||| |||||| ||| | | || | || |||||| || || |||||||| | Sbjct 5736 ACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAA 5677 Query 222063 GCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122 | || | || || || | || || ||||||| |||| ||| ||||| || || | Sbjct 5676 GAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGA 5617 Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 ||||| || | || |||||||||||||| || |||| ||| | || ||||| |||| Sbjct 5616 GGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCT 5557 Query 222183 TGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCA 222242 ||||||||||||| || || | | |||||| | || || | || || | Sbjct 5556 TGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAA 5497 Query 222243 GTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGG 222302 ||||| || |||||||| || || || | || ||| | | | | | Sbjct 5496 TGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGA 5437 Query 222303 CAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362 | | |||||||| || || || ||||||||||| || ||||||| ||||| Sbjct 5436 CGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGT 5377 Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422 ||| ||||| || ||| ||||| | | | ||| || || ||||||| ||||| | Sbjct 5376 AGATTCCCTCAATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCT 5317 Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482 | | | |||||| || ||||| || ||||||||| ||| | |||||||| | Sbjct 5316 GCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAA 5257 Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCATGGCGCATCT 222540 | | ||| || || | ||||| | |||||||| ||| || | || || || | Sbjct 5256 GGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCAGATACCTACA--GCAACACG 5199 Query 222541 CATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGAT 222598 |||| ||||| ||| |||||||| ||| || | ||||| | ||||| || Sbjct 5198 CATGATCATGTGCTGTGGCCTCTCGACAATCTTGCCATTGAGCT--TCAATAGGTAAGAC 5141 Query 222599 TTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCG 222658 | || ||||||||||| || || || | | || || || | | ||| || | || Sbjct 5140 CTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGAAATCACGGTCGTAGACAATAGCT 5081 Query 222659 GCGTCCAGCTCCGACTTGTG 222678 | ||| || ||| |||||| Sbjct 5080 GAGTCGAGATCCTCCTTGTG 5061 Score = 93.3 bits (102), Expect = 8e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124 ||| ||||| | ||| ||||| ||| |||| |||||| || ||| || || Sbjct 6650 CATGTCGTCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACTAC 6591 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 ||||| || || | ||||| | | ||||| | ||| ||||| | || || | || Sbjct 6590 CTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCA 6531 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 |||||||||||| ||||| || | |||||| || || |||||||| || || |||| || Sbjct 6530 CTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCT 6471 Query 221245 GTTGCG 221250 |||||| Sbjct 6470 GTTGCG 6465 >seq780 Length=8798 Score = 134 bits (148), Expect = 3e-26 Identities = 344/525 (66%), Gaps = 27/525 (5%) Strand=Plus/Minus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869 ||| ||||| | |||||| ||||| ||| |||||||| | | ||| | || Sbjct 1698 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACC 1639 Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929 |||| | ||| ||| | || || |||| || ||||| ||||| ||||||||| | ||| Sbjct 1638 TTTGCCACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTT 1579 Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGA 25988 || ||||||||||||||||| || || ||||| || ||| ||||| |||||||| Sbjct 1578 GCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTG-ACTTTCTCCAACGA 1520 Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCC- 26047 ||||||| | || |||||||| |||| || |||||||| || || | | || || Sbjct 1519 GCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCT 1460 Query 26048 -----ACTTGCTCCACAA--ACCTTCTCAA-GAGACCGTCTACAGTATCATCAAAGAGGC 26099 || || | |||| | || | || |||| || | || || || Sbjct 1459 GAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGT------TGTC------GATGC 1412 Query 26100 TGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAA 26159 ||| |||| ||| | ||||||| |||||||||| Sbjct 1411 TGTCAAGATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAA 1352 Query 26160 CAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGC-TGT-GCCAGCTG 26217 | || || |||| || |||||||||| ||| || ||| || | ||| ||| ||| Sbjct 1351 CGCCAACCTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCC--CTG 1294 Query 26218 GGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTG 26277 ||| || | ||||| || | | ||||| ||||| |||||||| ||||| || | Sbjct 1293 GGAAACGAGAAGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTC 1234 Query 26278 GAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 | || |||||||||||||| || || | || ||||| || ||| Sbjct 1233 GGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTACCAA 1189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928749036101120