Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734185.1_202014-07-28] 8,248 sequences; 36,211,322 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3819 104 2e-17 >seq3819 Length=8217 Score = 104 bits (114), Expect = 2e-17 Identities = 720/1146 (63%), Gaps = 47/1146 (4%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| || || |||||||| || |||||||| | | || | ||| ||| | ||| Sbjct 6598 TTGACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGC 6539 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 ||||| |||| || ||||| | ||||| | |||| | || ||||||||| || || Sbjct 6538 TCAAAGCACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACG 6479 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 | ||| || || | ||| | ||||||| |||| | || | ||||||||| Sbjct 6478 AGCAAGCTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCAG 6419 Query 147073 ATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTG 147132 | || ||| | ||||||||||||||||||||||| | ||| | | ||| Sbjct 6418 AGGTCTGAAGGCTTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGAT 6359 Query 147133 CCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGC--------CT 147184 || || | || | ||| || |||| || | || ||||||| | Sbjct 6358 CCCTCGTATGTCGAGTATGGACC------CTGCTCCTCTGCA-AGCTTGCAAGAGGCAGT 6306 Query 147185 CGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGC 147244 | || || | | ||| ||||| || ||| | ||||| || | || || Sbjct 6305 C-AGAGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAG 6247 Query 147245 TCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGA 147304 |||| |||||| ||| || | || || || |||| ||| |||| || | |||| Sbjct 6246 ACTCGAAAGGCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGA 6187 Query 147305 TAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT--ATGGGATAGTGGTTGCGATC 147362 |||| | || |||||| | | || || || | ||| |||| |||| || Sbjct 6186 TAGGCCTGTGGCGCATGTTGCT--GTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTC 6129 Query 147363 AATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATC 147422 || |||||||||||||| || || || |||| ||| | | ||||||||| || || Sbjct 6128 GATGATCTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTC 6069 Query 147423 ATA-AGTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGA 147481 || ||| | | | || ||| | ||| || || | || || || ||||| | Sbjct 6068 GTATTCACCCTTGTGGTAGTCG-ACGAACTGGGGCAGAGCCAGGGAAGCAAGGTTGCATA 6010 Query 147482 CGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTA 147541 | || ||| || | | | ||||| | || || | ||| |||||| || | Sbjct 6009 CAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCGAA 5950 Query 147542 TGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACG 147601 || || | || | ||| ||||| || || ||||| || ||| | |||||| ||| Sbjct 5949 TGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACG 5890 Query 147602 GTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTA---TGCAGGTCCTGCGCTC 147655 | || ||||| || | || | ||| | ||| | | | || ||| | || Sbjct 5889 GGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAATACCAAAGTTTCTGGGCCT-TGATC 5831 Query 147656 GCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGT 147715 | | || || || ||||| | || ||| ||| |||| ||| ||||| | Sbjct 5830 G-TCTTGCGACCCTTACCGGCC----TGCTCATACTTCTCATACAGAGCCTCGAACTCTT 5776 Query 147716 CGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGT 147775 | |||||||| || || ||||| || |||| | ||| ||||||| | ||| |||| Sbjct 5775 CACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCA---GTCG- 5720 Query 147776 CCGCGTT----AACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCG 147831 ||| || |||||| ||| |||||||| || | ||| || ||| | || || Sbjct 5719 CCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCA 5660 Query 147832 CGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATAGATGTC 147890 || || ||||| || ||| | | | | | || | | ||| || Sbjct 5659 CGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGA-AGACATC 5601 Query 147891 GGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTC 147947 |||||||| || |||| ||||| ||| | ||||| ||| || || |||||||| Sbjct 5600 TGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTC 5541 Query 147948 GACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCC 148007 ||| | ||| | ||||||| ||||| |||| |||||| | | |||| ||| ||||| Sbjct 5540 GACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCC 5481 Query 148008 GTTGGT 148013 |||||| Sbjct 5480 GTTGGT 5475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476562061385280