Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734185.1_202014-07-28] 8,248 sequences; 36,211,322 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1302 91.5 1e-13 >seq1302 Length=19947 Score = 91.5 bits (100), Expect = 1e-13 Identities = 185/271 (68%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 30188 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30247 ||||| || || ||| |||| ||||||||| ||| ||||| || || || || Sbjct 69 AGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCGGCGCCAAAG 128 Query 30248 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30307 || | ||| ||||| ||||| || || |||||||| ||| | || | ||||| || ||| Sbjct 129 TGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGCTGCAATCCC 188 Query 30308 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCTCAG 30365 | ||||| || || | | |||||| ||||||||||||| ||||| | || | Sbjct 189 AGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCGGCGTCGCTC 248 Query 30366 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCT 30425 || | ||| | | || | || ||||||||||||||||| | |||||| Sbjct 249 AG-GGGCTTCGCCG-ACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGATCACGGCCC 306 Query 30426 TCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | | ||||| | ||| ||||| || || || Sbjct 307 GCGAGAAGACGCGCTTCGTCGTCAGCAGAGG 337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406269556662816