Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734185.1_202014-07-28] 8,248 sequences; 36,211,322 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1302 91.5 1e-13 >seq1302 Length=19947 Score = 91.5 bits (100), Expect = 1e-13 Identities = 185/271 (68%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 27454 AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAA 27513 ||||| || || ||| |||| ||||||| | ||| ||||| || || || || Sbjct 69 AGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCGGCGCCAAAG 128 Query 27514 TGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 27573 || | ||||||||| ||||| || || |||||||| ||| | || | ||||| || ||| Sbjct 129 TGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGCTGCAATCCC 188 Query 27574 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCTCGG 27631 | ||||| || || | | |||||| ||||||||||||| ||||| | || | Sbjct 189 AGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCGGCGTCGCTC 248 Query 27632 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCT 27691 || | ||| | | || | || ||||||||||||||||| | |||||| Sbjct 249 AG-GGGCTTCGCCG-ACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGATCACGGCCC 306 Query 27692 TCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | | ||||| | ||| ||||| || || || Sbjct 307 GCGAGAAGACGCGCTTCGTCGTCAGCAGAGG 337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369470056212488