Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734215.1_202014-07-28] 5,947 sequences; 37,593,290 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq4789 109 6e-19 >seq4789 Length=7801 Score = 109 bits (120), Expect = 6e-19 Identities = 195/284 (69%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || ||||| ||||| || || ||| | |||||||| ||||||||||| ||||| Sbjct 825 ATGTACGTGTCGATCAGGAGCGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATCTGG 884 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| ||||| || | || || ||||| || |||||| || | || Sbjct 885 AAGCCGTAGAAGCAACGGGCCTCGGGAATCTGGACTTCGGCGCTGAATCGCTCAACGAGG 944 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| |||||||| || |||||||| || || | || || ||||| || Sbjct 945 TTCTCGTTGACGATGCCATCAGAAGCGGCGAAGAATGCAAGGATGTGTGAGATGAAGTAC 1004 Query 17414 TTTTCGTCCGGTGTAAG---AACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 ||||| || ||| || | |||||| | | ||| ||||| | ||| | ||| Sbjct 1005 TTTTCATCATCTGTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGACAAATCAATCTCT 1064 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCA 17514 |||| ||||| || ||| | ||||| || ||||| | ||| Sbjct 1065 TCGGCCGTCCAGAATGAGGCCTCGGCCTTCTTGTACATCTGCCA 1108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517507126953960