Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734215.1_202014-07-28] 5,947 sequences; 37,593,290 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq3775 98.7 8e-16 >seq3775 Length=22206 Score = 98.7 bits (108), Expect = 8e-16 Identities = 121/163 (74%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC 20990 || ||||||| | ||| ||||| || || |||| | |||| | | |||||| | Sbjct 20851 TCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCA-GCGACCCGGGCAC 20909 Query 20991 -AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGG 21049 || |||||| | | || |||| | |||||| || ||||||||||| ||||| || || Sbjct 20910 TAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGG 20969 Query 21050 GACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 || || |||||||||||| ||||| |||||| ||||||||| Sbjct 20970 CACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 21012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427744995196560