Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734215.1_202014-07-28] 5,947 sequences; 37,593,290 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq5665 138 1e-27 seq4789 118 1e-21 seq767 111 2e-19 seq949 105 7e-18 >seq5665 Length=29674 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | |||||||| |||||||| | || |||||| | | Sbjct 25088 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 25029 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | ||||| || |||| ||||| ||||| ||||| | ||||| Sbjct 25028 GACACGATTGACAATG-TTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCA 24970 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| || || ||| |||| || | ||||| || ||||||||| Sbjct 24969 ACAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAA 24910 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || ||||| ||||| |||||| || | || || Sbjct 24909 CATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGG 24862 Score = 134 bits (148), Expect = 1e-26 Identities = 165/219 (75%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| ||||| || || ||| | || |||||| || || Sbjct 25316 ATGCAGATTTTCGTCAAAACCCTCACTGGCAAGACGATTACCTTGGAGGTCGAGTCCTCC 25257 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | || | ||||| || |||| ||||| ||||| ||||| | |||| Sbjct 25256 GATACCATCGACAATG--TAAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACC 25199 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || || |||| ||| || || ||||| || |||| || ||||| |||||||| Sbjct 25198 AACAACGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACA 25139 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||||| ||| || || |||||||| || ||| Sbjct 25138 ACATCCAAAAGGAGAGC-ACCCTCCATTTGGTCCTTCGT 25101 Score = 105 bits (116), Expect = 7e-18 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || |||||||||||||| |||| || || | | Sbjct 24860 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 24801 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | |||| | ||| ||| || | ||||| ||||| | ||||||| |||| Sbjct 24800 GACACAATCGACAACG-TCAAATCAAAGATTCAAGACAAGGAGGGTA-TCCCGCCTGACC 24743 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || | || | |||||||| |||||||| || | | ||||| || |||| Sbjct 24742 AACAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGAAGAACCCTGTCTGATTACA 24683 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | || || ||||| |||| ||||| | ||||| ||| | | ||||| Sbjct 24682 ATATTCAGAAGGAGTCGACTCTGCACCTTGTGCTCCGTCTTCGTGGCGG 24634 Score = 93.3 bits (102), Expect = 4e-14 Identities = 124/170 (73%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| |||| || ||| | | ||| | | | | |||| | || Sbjct 25522 TCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACG-TCAAG 25464 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 || |||| ||||| ||||| || || | ||||||||||| || |||| || ||| Sbjct 25463 TCGAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGC 25404 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 || || || || |||| || || || ||||||||||||||| ||||| Sbjct 25403 AAGCAACTCGAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGA 25354 >seq4789 Length=7801 Score = 118 bits (130), Expect = 1e-21 Identities = 199/285 (70%), Gaps = 5/285 (2%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| |||||||| ||| ||| || | || ||||| | ||||||||| ||| || || Sbjct 827 GTACGTGTCGATCAGGAGCGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAA 886 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285 |||||| ||||| || |||||| | ||| ||||| | || ||| ||||| || || | Sbjct 887 GCCGTAGAAGCAACGGGCCTCGGGAATCTGGACTTCG-GCGCTGAATCGCTCAACGAGGT 945 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | |||||||||||||| || |||||||| || || || | ||| |||||| | Sbjct 946 TCTCGTTGACGATGCCATCAGAAGCGGCGAAGAATGCAAGGATGTGTGAGATGAAGTACT 1005 Query 133346 GCTCGTTGTC---GTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402 || | || | | | | ||||||| | |||||||||| || | ||| | Sbjct 1006 TTTCATCATCTGTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGACAAATCAATCTCTT 1065 Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACA 133447 || | ||||| || || |||||||| || |||||||| ||||| Sbjct 1066 CGGCCGTCCAGAATGAGGCCTCGGCCTTCTTGTACATCTGCCACA 1110 >seq767 Length=28643 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| || |||||| | || || ||| | | | Sbjct 3797 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 3738 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| || ||| | ||||| Sbjct 3737 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 3678 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | || ||||| ||||| || |||| | ||||| |||||||||| Sbjct 3677 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 3618 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||| || || || | ||||||||| || | || || Sbjct 3617 ATCCAGAAGGAGAGC-ACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 3571 >seq949 Length=12169 Score = 105 bits (116), Expect = 7e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || || ||||| ||||||||| | || |||||| || | |||| | Sbjct 5601 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 5660 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || || | ||||| |||||||||||| | ||||||||||| || Sbjct 5661 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTT 5720 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || ||||| ||| |||| |||| || || ||| ||||||||||||||| ||| Sbjct 5721 ATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAAG 5780 Query 38433 G 38433 | Sbjct 5781 G 5781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500135618404480