Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734215.1_202014-07-28] 5,947 sequences; 37,593,290 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3123 264 1e-65 seq5864 122 1e-22 >seq3123 Length=38259 Score = 264 bits (292), Expect = 1e-65 Identities = 435/626 (69%), Gaps = 6/626 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 27362 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCC 27421 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | ||| ||||| || ||||||||||| || || ||||| || ||| Sbjct 27422 TCCTCAATGGTAAGGAGCGACACATCGAAAGTACCACCACCAAGATCGAAAATAAGCACG 27481 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || ||||| || |||||||| ||||| || || || || || || Sbjct 27482 TTGCGCTCACCCTCGACCTTCTTGTCAAGACCGTAGGCGATGGCGGCGGCAGTAGGCTCG 27541 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || |||||| |||||||| | ||||| || || || || || Sbjct 27542 TTGATGATACGGAGGACGTTCAGACCAGCAATGAGACCGGCATCCTTGGTAGCCTGACGC 27601 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||| |||||||| ||||| || ||||| |||| |||| | ||| || Sbjct 27602 TGCGAGTCGTTGAAGTAGGCGGGGACGGTGACGACAGCGTTGTTGACGGTGCCACCAAGG 27661 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || || | || ||| ||||| | ||||| ||||| ||||| |||| | Sbjct 27662 TAAGACTCAGCAGTCTCACGCATCTTGGTCAAGACCATGGATGAGATCTCCTCAGGAGTG 27721 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| || | || || || || || || ||||| | || || ||| | | Sbjct 27722 AACTGCTTTGACTCTCCCTTGAACTCGACCTCAATGACAGGCTT---GCCAGACCTCTCG 27778 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | ||||| | | | | ||||| ||| | ||||||| ||| || ||||| | Sbjct 27779 ACGACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCGTCGGAGAACTTGCGA 27838 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || | | ||| || || || || ||||| | ||||||||| || |||||||| Sbjct 27839 CCAATCAACCTCTTCGCGTCGAAGACGGTGTTGTGGGGGTTCATAGCGACCTGGTTCTTG 27898 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 ||||| || ||||| ||||| || || ||||| ||||| ||| | || ||||| ||| Sbjct 27899 GCCGCATCTCCGATCAGACGCTCGGTA---TCCGTGAACGCCACGAAGGACGGGGTTGTT 27955 Query 8057 CGATTCCCTTGGTCGTTCGCAATAAT 8082 || || || ||||| || || ||||| Sbjct 27956 CGGTTACCCTGGTCATTGGCGATAAT 27981 >seq5864 Length=12971 Score = 122 bits (134), Expect = 1e-22 Identities = 324/492 (66%), Gaps = 6/492 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | ||| || || || ||||| || ||| || || | ||| Sbjct 1994 TCGAAATCCTCACCACCAAGGTGGGTGTCACCGGCGGTGGCCAGGACCTCGAAAACACCG 1935 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | ||||| || || || |||||||||||||| | | || | Sbjct 1934 TTGTCGATCGAAAGGAGGGAAACGTCGAAGGTGCCACCACCCAGGTCGTACACGATGATC 1875 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | | || ||| | | |||| || || |||||||| | ||| || ||||| || || Sbjct 1874 TGGTTCTCCTCGCC---GGTCTTGTCCAGGCCGTACGCCAAAGCGGCAGCCGTGGGCTCG 1818 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 |||| |||||||||| ||| || || |||||| | || || || ||||| || | Sbjct 1817 TTAACAATACGAAGAACGTTGAGACCGGCAATAACACCGGCGTCCTTTGTCGCCTGCCTC 1758 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || ||||| ||||| || || || || ||||| |||| || || ||||| || | Sbjct 1757 TGGTTGTCGTTGAAGTACGCGGGAACGGTGACGACGGCGTGGGTAACCTTCTTGCCCAAG 1698 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || || | || ||||| ||| | | ||| | || | ||| || | | Sbjct 1697 TAGGCCTCGGCAACCTCCTTCATCTTGCCCAAGATCATGGCCGAGACCTCCTCGGGGGTG 1638 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| || || ||||| || | ||| || || | ||| || ||| | | | Sbjct 1637 AACTGCTTGGTCTCACCCTTGACATCGACCGAAACAACGGGCTT-TCCTC--CCTTGTTC 1581 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | |||||| || | | | || ||||| | ||||| | | ||||| |||||| | Sbjct 1580 ACAACCTTGTAGGGGAAGTGCTTGATATCTTGCTGGACATCCTTGTCCGTAAACTTGCGA 1521 Query 7937 CCGATAAGACGC 7948 |||||||||||| Sbjct 1520 CCGATAAGACGC 1509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635085585815480