Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734235.1_202014-07-28] 7,622 sequences; 36,716,275 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1840 138 2e-27 seq3781 127 3e-24 >seq1840 Length=8190 Score = 138 bits (152), Expect = 2e-27 Identities = 338/511 (66%), Gaps = 10/511 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || || | ||| ||||| | || || |||||||| || Sbjct 5515 CAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCGTGGCACGCAGAT 5574 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| | | || ||| || || ||| || ||| | ||| Sbjct 5575 GTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAGGAGGAGATTCGTGCCCGTGAC 5634 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 |||| || || ||| | || ||| |||||||||||||||| | | ||| || Sbjct 5635 CTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGCGTTGAGAAAAACGGCGAC 5694 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| | | |||||||| || || || || || | || |||| || |||||||| Sbjct 5695 TGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTCGCGGACTGCTACGGTGAAGAGTTC 5754 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATA-----CGTGAGACGAGTCGATG 97170 ||||| ||| | || ||||| ||||| || || |||||| || | | Sbjct 5755 GAGGCTCTGTATGAGAAGTATGAGCA----GGCCGGTAAGGGTCGCAAGACGA-TCAAGG 5809 Query 97171 CACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | | |||| ||| | ||||| || ||||||| |||||||| | |||| ||| | Sbjct 5810 CCCAGAAACTTTGGTATTCCATCCTGGAGGCTCAGACTGAGACTGGTAACCCGTTCATGC 5869 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 | ||||||||| | || ||||| |||||||| || | || ||||| ||| Sbjct 5870 TGTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTCGCAGCT 5929 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTC 97350 |||| || |||||||| ||| | |||||| | | || |||||| || || ||| | Sbjct 5930 CCAACCTCTGCACGGAGATTATCGAGTACTCTGCCCCTGACGAGGTTGCTGTATGCAACC 5989 Query 97351 TGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 | || || | ||||||| |||| || || Sbjct 5990 TTGCTTCCCTGGCTCTGCCCCAGTTCGTCGA 6020 >seq3781 Length=7814 Score = 127 bits (140), Expect = 3e-24 Identities = 347/529 (66%), Gaps = 17/529 (3%) Strand=Plus/Minus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || ||||| | |||| | |||||||| ||| | ||||| | | ||| Sbjct 704 ATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACCTTTGCC 645 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | ||| | || ||||| | ||| ||||| |||||||| ||| |||||| || Sbjct 644 ACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCC 585 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| |||||||||||||| || || ||||| || ||||| | |||||| | || Sbjct 584 ATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTCATC 525 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCG 125599 || || || ||||| |||||| ||||||||| ||| ||||| |||| Sbjct 524 TCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGC----------- 476 Query 125600 TCCCG-AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGA 125658 ||| | | ||| ||| | | || || | | ||||| |||||| || | || Sbjct 475 TCCTGAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAGA 416 Query 125659 TAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGC 125718 | || ||||||||||| || || | | || | | | | ||||||||| ||| | Sbjct 415 TTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACC 356 Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCA 125778 | ||| ||||||| |||||||| || || | || || || || | | Sbjct 355 TGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTGGGAAACGAGA 296 Query 125779 AGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGA 125838 || | ||| |||| || || || ||||| ||| | ||| ||||| | || |||| Sbjct 295 AGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGCAAGA 236 Query 125839 CCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885 ||||||| |||||||| || |||||||| ||| || ||||||| Sbjct 235 CCAACTTCTTCGAGAAACGCGTTGGCGAGTACCAAAAAGC--CGGTGTC 189 Score = 127 bits (140), Expect = 3e-24 Identities = 203/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 ||| | |||||||| ||||| ||||||| || ||||||| ||||||| | ||| ||||| Sbjct 1111 TGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACGGCCGAAGAGATTGATTTGTCC 1052 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141 ||||| || |||| ||| | | | || || ||| | || || || ||| Sbjct 1051 AAGGATCTCCACGACTGGAACAACAAGCTCACAGATGATGAAAAGTACTTCATCTCACAC 992 Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACGATT 125200 || | || ||||| |||| || ||||| ||||||||||| || || ||||| ||||| Sbjct 991 ATCCTTGCATTCTTCGCCGCTTCTGATGGCATCGTCAACGAGAACCTCGTTGA-GCGATT 933 Query 125201 C-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTG 125259 | | | ||| | ||||| |||| ||||| ||||| ||||| |||||||| | Sbjct 932 CAGCGCCGAAGTCCA-GATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATGG 874 Query 125260 AGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 ||||| | ||||| || | ||||| ||||| |||| |||||| Sbjct 873 AGAACATTCACTCCGAGACTTACTCGCTCCTGATCGACACGTACAT 828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740988595584720