Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734235.1_202014-07-28] 7,622 sequences; 36,716,275 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3843 134 1e-26 seq1840 125 7e-24 seq1709 125 7e-24 >seq3843 Length=29683 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || ||||| | ||| ||||||||| |||||||| ||| Sbjct 25087 GCCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 25146 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| |||||||| || ||| | || | || || ||||||||||| Sbjct 25147 AAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGG 25206 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| ||| ||| | | || | ||||||| |||||||| Sbjct 25207 AATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGAC 25266 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||||| || || || || || ||||| ||||||||||||||| Sbjct 25267 CTCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCATG 25315 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || || || | || || |||||||| |||||||| ||| | Sbjct 24860 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 24919 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| | |||||| || ||| |||| | ||||| ||||||||||| Sbjct 24920 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 24979 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || || | | || | || || | ||||||| Sbjct 24980 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACC 25039 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || | ||| || ||||| ||||||||| Sbjct 25040 TCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 25087 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| | || | ||||||||||| ||||| |||||||| | Sbjct 24632 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 24691 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | ||||| ||||||||||| || |||| ||||| || ||||| || ||| Sbjct 24692 AGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 24751 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| | | || |||| | || | || || | || || | Sbjct 24752 ATACCCTCCTTGTC-TTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAAC 24810 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | |||||| ||||| || || || ||||| || ||||| Sbjct 24811 TTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 24858 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || ||||| | || | || |||||| || |||||||| ||| Sbjct 25315 GCCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGA 25374 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || |||||| || |||||||| || | || | |||||| ||||||||||| Sbjct 25375 AAGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGG 25434 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| ||| ||||| | || | |||||| | ||||| | Sbjct 25435 GATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCAC 25494 Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | ||| || || || Sbjct 25495 CTCGAGGGTGATGGTCTTGCCAGT 25518 >seq1840 Length=8190 Score = 125 bits (138), Expect = 7e-24 Identities = 405/618 (66%), Gaps = 13/618 (2%) Strand=Plus/Minus Query 145869 CCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCG 145928 |||| ||| | ||||||||| || | ||||| || |||| ||| || ||||||| | Sbjct 5758 CCTCGAACTCTTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGG 5699 Query 145929 ACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACA 145988 ||| ||||||| | ||||||| ||| |||| ||| || | ||| || ||| | Sbjct 5698 TCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGA 5639 Query 145989 TCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTAT 146048 || ||| || || ||||| || ||| | | | | || | ||| Sbjct 5638 ACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGA-ACTCG 5580 Query 146049 A-GATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCA 146104 | || || ||||||||||| |||| |||| ||| | ||| || || ||| ||| Sbjct 5579 AAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCA 5520 Query 146105 CCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTG 146164 |||||||| |||| || | ||||||| || || |||| |||||| | | |||| | Sbjct 5519 CCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTC 5460 Query 146165 GCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACG 146224 | |||||| ||| | || || ||| || || | || ||| || || | Sbjct 5459 GAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGACGTTGAGA 5400 Query 146225 CCGAGACCGCC-GCCGTACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGC 146282 |||| |||||| ||| | |||||| || ||| | |||| ||| || |||||||| | Sbjct 5399 CCGATACCGCCAGCCAT-CTTGGAGATCATGGCACAAGTC-TTGAGGGTGTCGTAGATTC 5342 Query 146283 CGTCAATGCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGG 146340 | |||||||| ||| |||| || | | ||| ||||| || ||| ||| ||| ||| Sbjct 5341 CCTCAATGCTGTCGTCCTTC--ATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGG 5284 Query 146341 CGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG 146400 || || || ||| | ||||||| ||||| || || | ||| | ||| | Sbjct 5283 TGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAAGGTT 5224 Query 146401 ATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAG 146460 || |||||||| | | ||||| ||| || || || | ||| || ||||||| Sbjct 5223 GTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCAGATACCTACAGCAACACGCATGAT 5164 Query 146461 CATGTGTTGGGGCCGCTC 146478 |||||| || |||| ||| Sbjct 5163 CATGTGCTGTGGCCTCTC 5146 Score = 105 bits (116), Expect = 6e-18 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| ||||||||||| | |||||| || || | ||| || || |||| Sbjct 6569 TTGACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGC 6510 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| ||||| |||||||| | || | || || |||||| || || Sbjct 6509 TCAAAGCACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACG 6450 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | || ||||| | || || | |||||||| |||| || | |||| ||||| Sbjct 6449 AGCAAGCTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCAG 6390 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT 145283 || | ||| | |||| ||||||||||||||| | ||| |||| Sbjct 6389 AGGTCTGAAGGCTTGACGTTCCACATGTCGTACTGGAGAATTCCCT 6344 >seq1709 Length=26057 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| | || | ||| |||||| || |||||||| ||| | Sbjct 13950 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 14009 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | |||||| ||||||||||| || |||| || |||||||||||||| ||| Sbjct 14010 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 14069 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || ||| | ||||| | Sbjct 14070 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACC 14129 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || || || || || || || ||||| |||||||||| Sbjct 14130 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 14178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471967828980480