Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734235.1_202014-07-28] 7,622 sequences; 36,716,275 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1840 360 4e-94 seq3781 150 3e-31 >seq1840 Length=8190 Score = 360 bits (398), Expect = 4e-94 Identities = 1230/1885 (65%), Gaps = 94/1885 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || | || || |||| || || || ||||||||||||||||| Sbjct 6911 ACAGTGAACTGAATCGGCTGGGCGGCTGCCTGCGTCCGCAGGTAGTACATGCCGGTCTTG 6852 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669 || || ||| ||||||| | ||||| | |||| |||| | || || Sbjct 6851 AGACCAAGCTT---CCAGCCGGTGAAATGCATCGAGGTGA---TCTTGCCC---ATGGTC 6801 Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729 |||| || || || | ||| || ||||| |||||| ||||| | | Sbjct 6800 GGGTC---------GCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCA 6750 Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789 | |||||||||||| | | || | || |||| |||||| || |||||| ||| Sbjct 6749 CGGTCAGCGGCCATCTGAACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGC 6690 Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC--CCTGTGT-ATGGTC 212846 | ||| ||||| |||| || || |||||||| | || || ||| | ||| | Sbjct 6689 TTCTTGGTATCCTCAGGGATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATA 6630 Query 212847 AGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCT-CCAGGCACTTGACCAGGTG 212905 | | | |||||| || ||| || || | || |||| ||||| || Sbjct 6629 CGGTTCTT---CATGTCGTCTGACCACAGACCAA-GCTCGACCAGATCCTTGAGCAACCA 6574 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 |||||||||| |||||| || || | ||||| | | ||||||| ||| ||||| || Sbjct 6573 GGGGTTGACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATA 6514 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 |||||| | || ||||||||| || || || |||| ||||| ||||| |||||||| || Sbjct 6513 GGGCTCAAAGCACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGC 6454 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085 || || | ||||| | || || || | |||| | | || | ||||||| Sbjct 6453 AACGAGCAAGCTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTC 6394 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145 ||| | | || ||| ||| |||||||||||||| |||| | || || | Sbjct 6393 CCAGAGGTCTGA-AGG--------CTTGACGTTCCACATGTCGTACTGGAGAATTCCCTG 6343 Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205 || || |||| ||| | ||||| || || ||||||| || |||| ||| || Sbjct 6342 TGAAACAGGAGATCCCTCGTATGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGA 6283 Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265 || ||| ||||||| ||||||||| ||||| |||| | ||||||| | ||||| Sbjct 6282 GGCAGTCAGAGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTC 6223 Query 213266 TGGGGACGTGAAGGGCATCATCA-TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 || ||| ||| |||| | ||| |||| | |||||||| || ||||| || | Sbjct 6222 AGGAGACTCGAAAGGCAGACGGAGTGCAA-GGAAAGCGTCAGCCAGACCTTGGACGCCCA 6164 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTG 213383 ||||| || ||||| | || ||| ||| | || ||||| | |||||| ||||| Sbjct 6163 GACCGATAGGCCTGTGGCGCATGTTGCTGTTGCGTGC-CTCCTGGACGGGGTAGTAGTTG 6105 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGAC---ATGGGCCAGGTAC 213440 ||||||||||||||||||||||| | |||| ||||| |||| || | | Sbjct 6104 ACTTCGATGATCTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGG---AGTTTC 6048 Query 213441 TCGTGATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGATGCTG 213494 || || |||| | || | || || |||| ||||| || | | Sbjct 6047 TCA------AAGTCGTATTCACCCTTGTGGTAGTCGACGAACTGGGGCAGAGCCAGGGAA 5994 Query 213495 GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554 || |||||||| || || ||||| | || | | | |||||| || ||||| ||||| ||| Sbjct 5993 GCAAGGTTGCATACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGG 5934 Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTT 213613 ||| || || ||||| || ||||||| ||||| ||| ||| | |||| |||||| Sbjct 5933 TTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGATCCTT 5875 Query 213614 GTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTA 213673 ||| |||||| | ||| || ||||| ||| | | |||| || ||| || | Sbjct 5874 GTACAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAATACCAAAGTTT 5815 Query 213674 CCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTC 213733 | |||||||| | | | ||| | | ||| | ||| |||| || || || | Sbjct 5814 CTGGGCCTTGATCGTCTTGC-GACCCTTACCGGCCTG--CTCATACTTCTCATACAGAGC 5758 Query 213734 GTTGAATTCGTGGCCCCAGACCCTGTCC---AGTCCCGGACAGGA-TGCGGGACACATGA 213789 | ||| || | || || | |||| || || || || | |||| ||||| | Sbjct 5757 CTCGAACTCTTCACCGTAG---CAGTCCGCGAGGCCAGGGCACTCGTTCGGG-CACATCA 5702 Query 213790 GGCTCCAGTCCCCGTCATCTCTGA-CTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848 | ||||||| |||| | ||| | | | || ||||||||| || |||| ||| || ||| Sbjct 5701 AGGTCCAGTCGCCGTTTT-TCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCG 5643 Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908 ||||||||| | || | |||| ||| ||| ||| || | || || || || Sbjct 5642 AGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAAC 5583 Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTG 213965 || |||| || |||||||||||||| | ||||||||||||||| || | || | ||| Sbjct 5582 TCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTG 5523 Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025 || |||||||| || | || ||||||| | ||||| | ||| || | ||| Sbjct 5522 CCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCG 5463 Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA- 214084 || || |||||||| || || ||||| ||||| | ||| | || ||| ||||| Sbjct 5462 TTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCAC---GGATGC-GATGGAC 5407 Query 214085 ---GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCAT 214141 ||| || || || || || ||||||||||||||| || | | | || || Sbjct 5406 GTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTA 5347 Query 214142 GATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCT 214201 ||| || | |||||||| || | | | | || |||||| ||| | || | |||| Sbjct 5346 GATTCCCTCAATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACT-GAGCCT 5288 Query 214202 G-GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGA 214260 | | | ||| | |||||||||||| ||| ||| || | | || ||| |||| | | Sbjct 5287 GCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAA 5228 Query 214261 GCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCA 214320 | ||||||| || | |||| |||| || ||| || ||| | || Sbjct 5227 GGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCAGATACCTACAGCAACACGCA 5168 Query 214321 TCAGCATGTGCTGGGGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGC 214377 | | ||||||||| ||||||| | || || ||| | ||| | ||||| || | Sbjct 5167 TGATCATGTGCTGTGGCCTCTCGACAATCTTGCCATTGAG---CTTCAATAGGTAAGACC 5111 Query 214378 GCTCCAGAGTCTTGAACCCAAAGTA 214402 ||| ||||||||||| || || || Sbjct 5110 TCTCGAGAGTCTTGAAGCCGAAATA 5086 >seq3781 Length=7814 Score = 150 bits (166), Expect = 3e-31 Identities = 345/518 (67%), Gaps = 15/518 (3%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || || || | ||||| |||||||| ||||| || | | |||||||||||| Sbjct 202 TGGTACTCGCCAACGCGTTTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCC 261 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGTGTC--AGGCCCATCTGTTCC 47953 || || ||| ||||||| | || ||| ||| || ||| | | | Sbjct 262 ATAAAATCGAATGGGTTGGTGGCACGGTAGACCTTCTCGTTTCCCAGGGCGA------CA 315 Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 || || || ||||| |||| ||||| | ||| ||| || ||||||||| | | Sbjct 316 AGAAGTCTGTCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAGG 375 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 |||| |||||| |||| || |||||||| | ||| |||| || || || | ||| Sbjct 376 AGGGCGCAGGGCAACGCCTCCGTAAGAAACTCTTGCTCAATCTTGACAGCATCGACAACA 435 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 |||| ||| || || ||| ||||| |||| || | | || | ||| Sbjct 436 ATCTCCTTCACAACCTCCTTGTTGGGCCTGTTGTTCAGGAGCGAGA---ACAGGAGACAG 492 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| |||| | || || || || ||||||| |||||||||| |||||| Sbjct 493 GCAAAGTCGGTGTGTAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAAAGTCAGACCA 552 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || | || ||||||||||| || | || |||| || ||||||||| Sbjct 553 GGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAAGATA 612 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || | ||||| ||| | || | | | || | | |||||||| | |||| Sbjct 613 CCCTCGACGACAGCGAAAGCGATCAGGCGCGTGGCAAAGGTTGACTTCTTGTCGGTGATC 672 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 || || |||||||| |||||||| |||||| || Sbjct 673 CACCTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGG 710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931444048212480