Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734235.1_202014-07-28] 7,622 sequences; 36,716,275 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1840 104 2e-17 >seq1840 Length=8190 Score = 104 bits (114), Expect = 2e-17 Identities = 720/1146 (63%), Gaps = 47/1146 (4%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| || || |||||||| || |||||||| | | || | ||| ||| | ||| Sbjct 6569 TTGACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGC 6510 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 ||||| |||| || ||||| | ||||| | |||| | || ||||||||| || || Sbjct 6509 TCAAAGCACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACG 6450 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 | ||| || || | ||| | ||||||| |||| | || | ||||||||| Sbjct 6449 AGCAAGCTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCAG 6390 Query 147073 ATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTG 147132 | || ||| | ||||||||||||||||||||||| | ||| | | ||| Sbjct 6389 AGGTCTGAAGGCTTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGAT 6330 Query 147133 CCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGC--------CT 147184 || || | || | ||| || |||| || | || ||||||| | Sbjct 6329 CCCTCGTATGTCGAGTATGGACC------CTGCTCCTCTGCA-AGCTTGCAAGAGGCAGT 6277 Query 147185 CGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGC 147244 | || || | | ||| ||||| || ||| | ||||| || | || || Sbjct 6276 C-AGAGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAG 6218 Query 147245 TCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGA 147304 |||| |||||| ||| || | || || || |||| ||| |||| || | |||| Sbjct 6217 ACTCGAAAGGCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGA 6158 Query 147305 TAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT--ATGGGATAGTGGTTGCGATC 147362 |||| | || |||||| | | || || || | ||| |||| |||| || Sbjct 6157 TAGGCCTGTGGCGCATGTTGCT--GTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTC 6100 Query 147363 AATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATC 147422 || |||||||||||||| || || || |||| ||| | | ||||||||| || || Sbjct 6099 GATGATCTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTC 6040 Query 147423 ATA-AGTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGA 147481 || ||| | | | || ||| | ||| || || | || || || ||||| | Sbjct 6039 GTATTCACCCTTGTGGTAGTCG-ACGAACTGGGGCAGAGCCAGGGAAGCAAGGTTGCATA 5981 Query 147482 CGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTA 147541 | || ||| || | | | ||||| | || || | ||| |||||| || | Sbjct 5980 CAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCGAA 5921 Query 147542 TGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACG 147601 || || | || | ||| ||||| || || ||||| || ||| | |||||| ||| Sbjct 5920 TGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACG 5861 Query 147602 GTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTA---TGCAGGTCCTGCGCTC 147655 | || ||||| || | || | ||| | ||| | | | || ||| | || Sbjct 5860 GGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAATACCAAAGTTTCTGGGCCT-TGATC 5802 Query 147656 GCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGT 147715 | | || || || ||||| | || ||| ||| |||| ||| ||||| | Sbjct 5801 G-TCTTGCGACCCTTACCGGCC----TGCTCATACTTCTCATACAGAGCCTCGAACTCTT 5747 Query 147716 CGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGT 147775 | |||||||| || || ||||| || |||| | ||| ||||||| | ||| |||| Sbjct 5746 CACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCA---GTCG- 5691 Query 147776 CCGCGTT----AACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCG 147831 ||| || |||||| ||| |||||||| || | ||| || ||| | || || Sbjct 5690 CCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCA 5631 Query 147832 CGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATAGATGTC 147890 || || ||||| || ||| | | | | | || | | ||| || Sbjct 5630 CGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGA-AGACATC 5572 Query 147891 GGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTC 147947 |||||||| || |||| ||||| ||| | ||||| ||| || || |||||||| Sbjct 5571 TGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTC 5512 Query 147948 GACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCC 148007 ||| | ||| | ||||||| ||||| |||| |||||| | | |||| ||| ||||| Sbjct 5511 GACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCC 5452 Query 148008 GTTGGT 148013 |||||| Sbjct 5451 GTTGGT 5446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476565790867920