Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734235.1_202014-07-28]
7,622 sequences; 36,716,275 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq1356 107 1e-18
>seq1356
Length=7592
Score = 107 bits (118), Expect = 1e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 27087 CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGG 27146
|||||| ||| || ||| || || || ||||| | ||| ||||| ||| || |
Sbjct 1371 CCTGTTGATCTCGAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGC 1312
Query 27147 TTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTC 27206
|| ||||| || |||||||||||| || |||| | ||| | | || || |
Sbjct 1311 GTCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCAC 1252
Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266
||| || ||| | | || ||||||| ||| || || | ||||||||| ||||| |||||
Sbjct 1251 TAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGG 1192
Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308
|| || || |||||||| | |||| |||||||||||| ||
Sbjct 1191 CACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 1150
Score = 104 bits (114), Expect = 2e-17
Identities = 266/400 (67%), Gaps = 10/400 (3%)
Strand=Plus/Minus
Query 27328 ACGTAAAACTG---ACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 27384
||||||||||| | | ||| |||||||| || || |||| || | ||| |||
Sbjct 1049 ACGTAAAACTGCGCAAACATG---TGGCACGGCGGCAGGACCATAAGCTTGAGGTCCTTG 993
Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 27444
|||||||| || | | | ||||| | ||| | ||||| | | || || ||||
Sbjct 992 GGGTTCCAAGCACTAAGAACCATGCGGCGGTCGTACGGGTTCGTGCGGAGCTTGTGCACG 933
Query 27445 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCT 27504
| | ||||| || || ||| |||| ||||||| | ||| ||||| ||
Sbjct 932 ACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCG 873
Query 27505 GCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 27564
|| || || || | ||||||||| ||||| || || |||||||| ||| | || | ||||
Sbjct 872 GCGCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGC 813
Query 27565 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC- 27623
| || ||| | ||||| || || | | |||||| ||||||||||||| |||||
Sbjct 812 TGCAATCCCAGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCG 753
Query 27624 -CTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 27682
| || | || | ||| | | || | || ||||||||||||||||| |
Sbjct 752 GCGTCGCTCAG-GGGCTTCGCCG-ACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGA 695
Query 27683 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722
|||||| | | ||||| | ||| ||||| || || ||
Sbjct 694 TCACGGCCCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGG 655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369472875321482
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |