Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734265.1_202014-07-28] 8,518 sequences; 35,871,377 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3988 387 3e-102 seq366 190 4e-43 >seq3988 Length=8187 Score = 387 bits (428), Expect = 3e-102 Identities = 1127/1716 (66%), Gaps = 71/1716 (4%) Strand=Plus/Minus Query 243741 TGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799 ||||||| | ||| || | |||| |||| |||| |||||||||||||||||||||||| Sbjct 6906 TGAACTGAATCGGCTGGG-CGGCTGCCTGCGTCCGCAGGTAGTACATGCCGGTCTTGAGA 6848 Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859 ||| |||| || || ||||| | || | ||| ||| ||||| Sbjct 6847 CCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCAT-----------GGTCG 6799 Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCG 243919 |||| || || |||||| |||||| |||||| | ||||| | || || ||| Sbjct 6798 GG-TCGCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCG 6740 Query 243920 GCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAG 243978 ||||| | || ||| | | || || ||||| | | |||||||||| |||| Sbjct 6739 GCCATCTGAACGACGGTACGT-TGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGT 6681 Query 243979 GTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCG 244038 | ||| |||| | | |||||||| | ||||| | | |||||| || | Sbjct 6680 ATCCTCAGGGATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTT 6621 Query 244039 CATGTTATCGTTCCACAGGCCCAAGCGCT-CCAGCGCCTCGA----CCAGGTGCCTGTTC 244093 ||||| || |||||| || |||| | |||| ||| || ||||| | || Sbjct 6620 CATGTCGTCTGACCACAGACC-AAGCTCGACCAGATCCTTGAGCAACCAGGGG----TTG 6566 Query 244094 ACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCG 244153 || ||||| ||||| || | ||||| ||||| ||||| | |||| | ||||| Sbjct 6565 ACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCA 6506 Query 244154 ATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGC 244213 | || ||| ||||||| || || || | |||||| || || |||||||| | || ||| Sbjct 6505 AAGCACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGC 6446 Query 244214 AGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATG 244273 | ||||| | || || || || |||| | |||| ||| ||||||||| | | Sbjct 6445 AAGCTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCAGAGG 6386 Query 244274 CCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACG 244333 | || ||| |||| | ||||||||| |||| || | |||| || Sbjct 6385 TCTGA-AGGC--------TTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACA 6335 Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTC 244392 || |||||||| |||| ||| ||||| | || || ||||| || | ||| Sbjct 6334 GGAGATCCCTCGTATGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTC 6275 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452 || || |||| |||||||||||| |||||| ||||||| | || || |||| | | | Sbjct 6274 -AGAGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCT--CAGGA 6218 Query 244453 GGT--GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 | ||| || | | | | ||| |||| ||||| || || ||||| | ||| Sbjct 6217 GACTCGAAAGGCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCG 6158 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTC 244569 || || ||||| ||| ||||| | || || || | || |||||||| ||||| | || Sbjct 6157 ATAGGCCTGTGGCGCATGTTGCTGTTGCGTGCCTCCTGG-ACGGGGTAGTAGTTGACTTC 6099 Query 244570 GATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTC 244629 ||| | ||||||||||||||| | | | ||| || || || |||||| Sbjct 6098 GATGATCTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTC 6039 Query 244630 GTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGC 244689 ||| || | ||| | |||| || || |||| | || || | | || Sbjct 6038 GTATTC------ACCCTTG----TGGTAGTCG--ACGAACTGGGGCAGAGCCAGGGAAGC 5991 Query 244690 CAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTT 244749 |||||||| || || ||||| || | | | ||||| || |||||| ||||||||||| Sbjct 5990 AAGGTTGCATACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTT 5931 Query 244750 ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTA 244809 || ||||| || |||| || || ||| |||| ||||||| |||||||| Sbjct 5930 GGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTA 5871 Query 244810 GAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCT 244869 |||||||| || || ||||| ||| || | |||| | | ||| || | | Sbjct 5870 CAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAATACCAAAGTTTCTG 5811 Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929 ||||||| |||| ||||| |||| || | ||| || ||||| |||||||| Sbjct 5810 GGCCTTGATCGTCTTGCGACCCTTACCGGCCTGCTCATACTTCTCATACAGAGCCTCGAA 5751 Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTC 244989 ||| || || || | ||||| |||||| ||||||||| | |||| || Sbjct 5750 CTCTTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTC 5691 Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049 |||| | || || | || |||||| || || |||||||| || || |||| ||||| Sbjct 5690 GCCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTC 5631 Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109 | || | ||| ||| || ||||||||| || || | || || ||||| || Sbjct 5630 ACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATC 5571 Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169 ||||||| ||||| | ||||| || | ||| ||||| ||||||||||| |||||||| Sbjct 5570 TGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTC 5511 Query 245170 CACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGT 245225 | | | ||||| |||||| | ||||| | || || |||||||| ||| Sbjct 5510 GA----CGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGG 5455 Query 245226 GGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----ATG 245281 ||||||||| || ||| |||| ||| || | | || ||| ||||||| | Sbjct 5454 TGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCAC---GGATGC-GATGGACGTTGAGA 5399 Query 245282 CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCC 245341 || | ||||| || ||||||||| | ||| || |||||| |||||| || ||| Sbjct 5398 CCGATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATTCCC 5339 Query 245342 TCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTG 245401 || |||||||| |||||| | | ||| ||||| || |||| ||| | || || || Sbjct 5338 TCAATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTG 5279 Query 245402 CACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 | | |||||| || || ||| |||||| || ||| Sbjct 5278 CCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAG 5243 >seq366 Length=8788 Score = 190 bits (210), Expect = 4e-43 Identities = 360/518 (69%), Gaps = 15/518 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691 ||||||||| |||||||| |||||||| || | |||||| | | | || | |||| Sbjct 7095 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATC-ACCGACAAGAAGTCAAC 7153 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | | ||| | || || | | ||||||||| ||||||||| || || || Sbjct 7154 CTTTGCCACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTT 7213 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC--GATGCCCGGACTCACCTTCTCGAAC 42809 ||||||||||||||||||||| || ||| | |||||| || || || ||||| ||| Sbjct 7214 TGCCTCCATCTTCTGGCTCAAGAAG--CGTGGCCTGATGCCTGGTCTGACTTTCTCCAAC 7271 Query 42810 GAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGC 42869 || |||||| | || ||||| || || | ||||||||||| |||||||||||| Sbjct 7272 GAGCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCG--- 7328 Query 42870 CACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929 | ||| | ||| |||| |||||| || || || | || || || || Sbjct 7329 CTCCTGAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAG 7388 Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC 42989 || ||| | ||||| || ||| || || ||||| |||| | ||||||||| | || Sbjct 7389 ATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAAC 7448 Query 42990 CTCATGTGCAAGTACATCCAGTACGTCGCCGAC-CATCTCCTGT-GCCAGATGGGTCTC- 43046 || ||| ||||||| ||| ||||| ||| | || ||| ||| |||| | Sbjct 7449 CTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCC--CTGGGAAACG 7506 Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106 || | ||||| | | ||| ||||| ||||||||||||||||| | | ||| Sbjct 7507 AGAAG-GTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGC 7565 Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||||||| |||||||| ||||| | ||| ||||| Sbjct 7566 AAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTACCA 7603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944238651483680