Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734265.1_202014-07-28] 8,518 sequences; 35,871,377 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3988 152 6e-32 >seq3988 Length=8187 Score = 152 bits (168), Expect = 6e-32 Identities = 444/675 (66%), Gaps = 28/675 (4%) Strand=Plus/Minus Query 115526 TGAACTGAATGGGTCT---CGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGA 115582 |||||||||| || || || || |||| | || ||||||||||| || ||||||| Sbjct 6906 TGAACTGAATCGG-CTGGGCGGCT--GCCTGCGTCCGCAGGTAGTACATGCCGGTCTTGA 6850 Query 115583 GCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCA 115642 | || |||||||| | | |||||| |||| | |||| | || || || Sbjct 6849 GACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGGGTCGCGCA 6790 Query 115643 TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAA 115702 || || ||| | ||||| || || |||||| || || || || ||||| | || Sbjct 6789 TGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGAA 6730 Query 115703 TCACA-TCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761 || | | | | ||| ||||| ||||| ||||||| ||||| |||| || ||| Sbjct 6729 CGACGGTACGTTG-CGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATCCTCAGGG 6671 Query 115762 ATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGA---TCCTTCATATCC 115818 || | || || ||||| ||||| || || | | |||| | | |||||| || Sbjct 6670 ATGCTGGCAATGTTCTGGATGGAGCCTCC---CTCGGCGATGATACGGTTCTTCATGTCG 6614 Query 115819 TTTGACCAGAGACCAATCTTCTTGAGATCCT----CCACGAGGTGCTTATTGACAACAAC 115874 | |||||| ||||||| || ||||||| | || ||| | ||||| || Sbjct 6613 TCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGG----TTGACTACCTG 6558 Query 115875 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTC 115934 ||||| || || || || | | || ||||||| || || |||||||||||||| Sbjct 6557 GAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACTC 6498 Query 115935 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 ||||| || | |||||| | ||| ||||| |||||||| || | ||| | |||||| Sbjct 6497 GTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGTT 6438 Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT-- 116052 ||||| ||| | | ||| ||||||| ||||||||||| | ||| | | Sbjct 6437 GCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCA---GAGGTCTGA 6381 Query 116053 -GTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAA 116111 | || | | |||||| || ||||||| || || || || | || |||||||| | Sbjct 6380 AGGCTTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCTCGTA 6321 Query 116112 TGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATA 116171 |||| ||||| |||| |||| || | | | | || || || ||||| || Sbjct 6320 TGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTCAGAGCAGCGTGGTA 6261 Query 116172 CATTGTCTCAAAAAT 116186 || |||||||| || Sbjct 6260 GATGGTCTCAAAGAT 6246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613441876820880