Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734265.1_202014-07-28] 8,518 sequences; 35,871,377 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq8472 120 2e-22 seq8304 105 4e-18 >seq8472 Length=29681 Score = 120 bits (132), Expect = 2e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||||||||| |||||||||||||| ||||| || || ||||| || || Sbjct 25103 AGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGA 25162 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || || || || || || | || ||||||||||| || | |||||| Sbjct 25163 CCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCC 25222 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 ||||| |||||| |||| || || || | ||| || |||| ||| Sbjct 25223 TTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTA 25282 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| || || || | ||||| || |||||||||||| Sbjct 25283 ATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCATG 25321 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | |||||| | ||| | || ||||| |||||| ||||| || ||||| || Sbjct 24638 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 24697 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | || || || || || || ||||| || ||||| |||||||| ||||| Sbjct 24698 AGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 24757 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| ||| |||| ||| ||| | ||||||||| || || Sbjct 24758 ATACCCTCCTTGTCT-TGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAAC 24816 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || ||||| ||||| | ||| || || || || ||||| Sbjct 24817 TTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 24864 Score = 111 bits (122), Expect = 1e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 |||||||| |||||||| || ||||| || || |||||||| || |||| || ||||| Sbjct 25346 TGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTCGAGTTGC 25405 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || |||||||| || | ||||||||||||||| || | ||||||||||| |||||| Sbjct 25406 TTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTT 25464 Score = 96.9 bits (106), Expect = 2e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||||| || ||||| |||||||| ||||| || || || || || || Sbjct 24875 AGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGT 24934 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || | || || || || || || | |||||||||||||| || | |||||| Sbjct 24935 CCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCC 24994 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | |||||| | ||| |||||| ||| || |||| || Sbjct 24995 TTGTCTTGGATC-TTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGT 25053 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || || || || || || || || ||||||||| Sbjct 25054 GATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 25093 >seq8304 Length=26005 Score = 105 bits (116), Expect = 4e-18 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||| | ||||| ||||||||||| || ||||| || || || || || | Sbjct 13949 AGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTG 14008 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || || |||||||| || || ||||| |||||||| || | |||||| Sbjct 14009 CCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCC 14068 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGG 34666 ||||| |||| || | || || | || ||||| ||| |||||| || | || Sbjct 14069 TTGTCCTGGATC-TTGGACTTGACATTGTCGATGGTGTCGCTCG-ACTCCACCTCAAGGG 14126 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || || || || || | || || || || ||||||||| Sbjct 14127 TGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 14167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314696926936694