Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734275.1_202014-07-28] 8,190 sequences; 36,679,878 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq1860 91.5 1e-13 >seq1860 Length=1327 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/112 (79%), Gaps = 1/112 (1%) Strand=Plus/Plus Query 20982 CCCGGGGTC-AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGAT 21040 |||||| | || |||||| | | || |||| | |||||| || ||||||||||| || Sbjct 22 CCCGGGCACTAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAAT 81 Query 21041 GTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 ||| || || || || |||||||||||| ||||| |||||| ||||||||| Sbjct 82 GTTGAAGGGCACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427733301271200