Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734275.1_202014-07-28] 8,190 sequences; 36,679,878 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq5457 387 3e-102 seq981 190 4e-43 >seq5457 Length=4783 Score = 387 bits (428), Expect = 3e-102 Identities = 1127/1716 (66%), Gaps = 71/1716 (4%) Strand=Plus/Plus Query 243741 TGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799 ||||||| | ||| || | |||| |||| |||| |||||||||||||||||||||||| Sbjct 1251 TGAACTGAATCGGCTGGG-CGGCTGCCTGCGTCCGCAGGTAGTACATGCCGGTCTTGAGA 1309 Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859 ||| |||| || || ||||| | || | ||| ||| ||||| Sbjct 1310 CCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCAT-----------GGTCG 1358 Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCG 243919 |||| || || |||||| |||||| |||||| | ||||| | || || ||| Sbjct 1359 GG-TCGCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCG 1417 Query 243920 GCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAG 243978 ||||| | || ||| | | || || ||||| | | |||||||||| |||| Sbjct 1418 GCCATCTGAACGACGGTACGT-TGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGT 1476 Query 243979 GTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCG 244038 | ||| |||| | | |||||||| | ||||| | | |||||| || | Sbjct 1477 ATCCTCAGGGATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTT 1536 Query 244039 CATGTTATCGTTCCACAGGCCCAAGCGCT-CCAGCGCCTCGA----CCAGGTGCCTGTTC 244093 ||||| || |||||| || |||| | |||| ||| || ||||| | || Sbjct 1537 CATGTCGTCTGACCACAGACC-AAGCTCGACCAGATCCTTGAGCAACCAGGGG----TTG 1591 Query 244094 ACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCG 244153 || ||||| ||||| || | ||||| ||||| ||||| | |||| | ||||| Sbjct 1592 ACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCA 1651 Query 244154 ATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGC 244213 | || ||| ||||||| || || || | |||||| || || |||||||| | || ||| Sbjct 1652 AAGCACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGC 1711 Query 244214 AGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATG 244273 | ||||| | || || || || |||| | |||| ||| ||||||||| | | Sbjct 1712 AAGCTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCAGAGG 1771 Query 244274 CCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACG 244333 | || ||| |||| | ||||||||| |||| || | |||| || Sbjct 1772 TCTGA-AGGC--------TTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACA 1822 Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTC 244392 || |||||||| |||| ||| ||||| | || || ||||| || | ||| Sbjct 1823 GGAGATCCCTCGTATGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTC 1882 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452 || || |||| |||||||||||| |||||| ||||||| | || || |||| | | | Sbjct 1883 -AGAGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCT--CAGGA 1939 Query 244453 GGT--GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 | ||| || | | | | ||| |||| ||||| || || ||||| | ||| Sbjct 1940 GACTCGAAAGGCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCG 1999 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTC 244569 || || ||||| ||| ||||| | || || || | || |||||||| ||||| | || Sbjct 2000 ATAGGCCTGTGGCGCATGTTGCTGTTGCGTGCCTCCTGG-ACGGGGTAGTAGTTGACTTC 2058 Query 244570 GATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTC 244629 ||| | ||||||||||||||| | | | ||| || || || |||||| Sbjct 2059 GATGATCTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTC 2118 Query 244630 GTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGC 244689 ||| || | ||| | |||| || || |||| | || || | | || Sbjct 2119 GTATTC------ACCCTTG----TGGTAGTCG--ACGAACTGGGGCAGAGCCAGGGAAGC 2166 Query 244690 CAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTT 244749 |||||||| || || ||||| || | | | ||||| || |||||| ||||||||||| Sbjct 2167 AAGGTTGCATACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTT 2226 Query 244750 ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTA 244809 || ||||| || |||| || || ||| |||| ||||||| |||||||| Sbjct 2227 GGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTA 2286 Query 244810 GAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCT 244869 |||||||| || || ||||| ||| || | |||| | | ||| || | | Sbjct 2287 CAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAATACCAAAGTTTCTG 2346 Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929 ||||||| |||| ||||| |||| || | ||| || ||||| |||||||| Sbjct 2347 GGCCTTGATCGTCTTGCGACCCTTACCGGCCTGCTCATACTTCTCATACAGAGCCTCGAA 2406 Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTC 244989 ||| || || || | ||||| |||||| ||||||||| | |||| || Sbjct 2407 CTCTTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTC 2466 Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049 |||| | || || | || |||||| || || |||||||| || || |||| ||||| Sbjct 2467 GCCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTC 2526 Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109 | || | ||| ||| || ||||||||| || || | || || ||||| || Sbjct 2527 ACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATC 2586 Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169 ||||||| ||||| | ||||| || | ||| ||||| ||||||||||| |||||||| Sbjct 2587 TGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTC 2646 Query 245170 CACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGT 245225 | | | ||||| |||||| | ||||| | || || |||||||| ||| Sbjct 2647 GA----CGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGG 2702 Query 245226 GGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----ATG 245281 ||||||||| || ||| |||| ||| || | | || ||| ||||||| | Sbjct 2703 TGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCAC---GGATGC-GATGGACGTTGAGA 2758 Query 245282 CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCC 245341 || | ||||| || ||||||||| | ||| || |||||| |||||| || ||| Sbjct 2759 CCGATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATTCCC 2818 Query 245342 TCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTG 245401 || |||||||| |||||| | | ||| ||||| || |||| ||| | || || || Sbjct 2819 TCAATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTG 2878 Query 245402 CACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 | | |||||| || || ||| |||||| || ||| Sbjct 2879 CCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAG 2914 >seq981 Length=8774 Score = 190 bits (210), Expect = 4e-43 Identities = 360/518 (69%), Gaps = 15/518 (3%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691 ||||||||| |||||||| |||||||| || | |||||| | | | || | |||| Sbjct 1699 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATC-ACCGACAAGAAGTCAAC 1641 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | | ||| | || || | | ||||||||| ||||||||| || || || Sbjct 1640 CTTTGCCACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTT 1581 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC--GATGCCCGGACTCACCTTCTCGAAC 42809 ||||||||||||||||||||| || ||| | |||||| || || || ||||| ||| Sbjct 1580 TGCCTCCATCTTCTGGCTCAAGAAGC--GTGGCCTGATGCCTGGTCTGACTTTCTCCAAC 1523 Query 42810 GAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGC 42869 || |||||| | || ||||| || || | ||||||||||| |||||||||||| Sbjct 1522 GAGCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCG--- 1466 Query 42870 CACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929 | ||| | ||| |||| |||||| || || || | || || || || Sbjct 1465 CTCCTGAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAG 1406 Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC 42989 || ||| | ||||| || ||| || || ||||| |||| | ||||||||| | || Sbjct 1405 ATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAAC 1346 Query 42990 CTCATGTGCAAGTACATCCAGTACGTCGCCGAC-CATCTCCTGT-GCCAGATGGGTCTC- 43046 || ||| ||||||| ||| ||||| ||| | || ||| ||| |||| | Sbjct 1345 CTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCC--CTGGGAAACG 1288 Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106 || | ||||| | | ||| ||||| ||||||||||||||||| | | ||| Sbjct 1287 AGAAG-GTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGC 1229 Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||||||| |||||||| ||||| | ||| ||||| Sbjct 1228 AAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTACCA 1191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944242523274400