Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734275.1_202014-07-28] 8,190 sequences; 36,679,878 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1860 102 1e-16 >seq1860 Length=1327 Score = 102 bits (112), Expect = 1e-16 Identities = 270/404 (67%), Gaps = 14/404 (3%) Strand=Plus/Plus Query 147106 ACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATG-GCGGGCAGGTCCGCGG 147163 ||||||||||| ||| | ||||||||||||||||| |||| || | |||||| || Sbjct 233 ACGTAAAACTGCGCAAAC-ATGTGGCACGGCGGCAGGACCATAAGCTTG-AGGTCCTTGG 290 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223 ||||||| || | |||| || | | | |||||| | | || | | Sbjct 291 GGTTCCAAGCACTAAGAACCATGCGGCGGTCGTACGGGTTCGTGCGGAGCTTGTGCA--- 347 Query 147224 CCCACCTC----AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTAC 147279 | ||||| |||||||| |||||||||||| ||||| || |||||| ||| Sbjct 348 -CGACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTAT 406 Query 147280 CTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTG 147339 ||| |||||||| | ||| ||||||||||| || || ||||||||||| || | | Sbjct 407 TCGGCGCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGG 466 Query 147340 TGCGAGAAGCCC-GCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCAC 147398 ||| || ||| ||||| | || ||||| || |||| | |||||||||| || Sbjct 467 TGCTGCAATCCCAGCCCG-TCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGAC 525 Query 147399 TCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTC 147458 || | || || ||| | ||| | |||| | |||||| |||||||| Sbjct 526 CCCGGCGTCGCTCAGGGGCTTCGCCGACGTCGCGCCCGACACGAACCACAGCAGCTCGAG 585 Query 147459 CAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 | || ||| | | ||||| | ||| || |||||||| |||| Sbjct 586 GATCACGGCCCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGGGA 629 Score = 84.2 bits (92), Expect = 3e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 147006 CATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCC 147065 ||||| || ||||| | ||||||||| ||||||||||| || || ||||||||||| | Sbjct 52 CATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGGCACGCCTAGGCCCATGTCGCA 111 Query 147066 CGACCTCTGGTACAGCTGGCA 147086 |||| |||||| |||||||| Sbjct 112 GGACCGCTGGTAGAGCTGGCA 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583428265416000