Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734275.1_202014-07-28] 8,190 sequences; 36,679,878 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1860 125 6e-24 >seq1860 Length=1327 Score = 125 bits (138), Expect = 6e-24 Identities = 279/408 (68%), Gaps = 12/408 (3%) Strand=Plus/Plus Query 6721 ATTCGCGACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGAT 6779 || || |||||| || || ||| | |||||||||| || || |||| || ||| | Sbjct 226 ATACGAGACGTAAAACTGCGCAAACA-TGTGGCACGGCGGCAGGACCATAAGCTTGAGGT 284 Query 6780 CCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTG- 6838 |||| |||||||| || | | || || | | ||| | |||||| | | || | Sbjct 285 CCTTGGGGTTCCAAGCACTAAGAACCATGCGGCGGTCGTACGGGTTCG--TGC--GGAGC 340 Query 6839 TCGATCACGTACT--GC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCC 6895 | | |||| || || |||||||| | ||||| |||| ||||| || | || | Sbjct 341 TTGTGCACGACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCG 400 Query 6896 CGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCC 6955 || || || |||||||| | ||| ||||| |||||||| ||||||| ||||||| || Sbjct 401 GTGTATTCGGCGCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACC 460 Query 6956 TCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATC 7015 || || | || ||| || |||||| || || || |||| ||||||||||| Sbjct 461 TCGCGGTGCTGCAATCCCAGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATC 520 Query 7016 TTCACCCCCCGGGACG-AGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAG 7074 || | |||| | | || || ||| | ||| || ||| ||||||||||||||| Sbjct 521 TTGA-CCCCGGCGTCGCTCAGGGGCTTCGCCGACGTCGCGCCCGACACGAACCACAGCAG 579 Query 7075 CTCCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 ||| || |||| || | || | || || |||||||||||||| || Sbjct 580 CTCGAGGATCACGGCCCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGG 627 Score = 125 bits (138), Expect = 6e-24 Identities = 279/408 (68%), Gaps = 12/408 (3%) Strand=Plus/Minus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 || |||||||||||||| || || | || | || |||| || ||||||||||||||| Sbjct 627 CCTCTGCTGACGACGAAGCGCGTCTTCTCGCGGGCCGTGATCCTCGAGCTGCTGTGGTTC 568 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCT-CGTCCCGGGGGGTGAAGATCTGGGACGC 34341 ||| ||| || ||| | ||| || || | | |||| | ||||||||||||| Sbjct 567 GTGTCGGGCGCGACGTCGGCGAAGCCCCTGAGCGACGCCGGGG-TCAAGATCTGGGACGG 509 Query 34342 TCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTT 34401 |||| || || || |||||| || ||| || | || |||| ||||||| | Sbjct 508 CAACGGCAGCCGTGAGTTCCTGGACGGGCTGGGATTGCAGCACCGCGAGGTGGGCGACCT 449 Query 34402 GGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGC 34461 |||||| |||||||| ||||| ||| | |||||||| || || || | || | || Sbjct 448 GGGCCCCGTCTACGGCTTCCAATGGCGCCACTTTGGCGCCGAATACACCGACTGCCACGC 389 Query 34462 GGACTATTCGGGACAGGGAGCGGACCAGCT-GC--AGTACGTGATCGA-CACCTTGAAGC 34517 ||||| |||| ||||| | |||||||| || || |||| | | | || | | Sbjct 388 AGACTACACGGGCCAGGGCGTCGACCAGCTCGCCGAGGTCGTGCACAAGCTCC--GCA-- 333 Query 34518 GGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGA 34577 |||||| | ||| | | || || | | || |||||||| ||||| ||| || | Sbjct 332 CGAACCCGTACGACCGCCGCATGGTTCTTAGTGCTTGGAACCCCAAGGACCTCAAGCTTA 273 Query 34578 TGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGTCGCGAAT 34624 ||| || || |||||||||| | ||| || || |||||| || || Sbjct 272 TGGTCCTGCCGCCGTGCCACA-TGTTTGCGCAGTTTTACGTCTCGTAT 226 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 6592 CAGCTCCCCAGGAACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACT 6651 |||| ||| || || | ||| | || | || ||||||| ||| ||||| ||||| || Sbjct 16 CAGCGACCCGGGCACTAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCT 75 Query 6652 AGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 ||||||||||| ||||| |||| |||||||| | || || || |||||||||||| Sbjct 76 GGCAATGTTGAAGGGCACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 133 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || || | |||||||| |||| ||||| ||||||||||| || Sbjct 133 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTAGGCGTGCCCTTCAACATTGCCAG 74 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTG 34753 ||||| ||||| ||| ||||||| || | || | ||| | || || ||| |||| Sbjct 73 CTACGCACTGCTGACGCACATGATTGCGCGTGCCACGGGTCTAGTGCCCGGGTCGCTG 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448216509136800