Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734315.1_202014-07-28] 6,575 sequences; 37,493,836 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1582 105 7e-18 seq6086 91.5 1e-13 seq3863 89.7 5e-13 >seq1582 Length=39032 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||||||||| || ||| ||||| || |||||||||||| | ||| Sbjct 25015 AGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTG 24956 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| ||||| ||||| ||||| |||||||| || || || || || || Sbjct 24955 CCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCC 24896 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | |||||| ||| ||||| || || || Sbjct 24895 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTG 24836 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | || || ||||| || ||||| Sbjct 24835 ATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 24798 >seq6086 Length=29700 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||||||| || || ||||| || |||||||||||| | Sbjct 4353 CCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAA 4294 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || ||| ||||| || ||||| |||||||| | |||||| || || || || Sbjct 4293 AGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGG 4234 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | || ||| || ||||| Sbjct 4233 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACC 4174 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| || || || Sbjct 4173 TCGAGGGTGATGGTCTTGCCAGT 4151 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || | ||| || || ||||||||||| |||||||||||| | ||| | Sbjct 4800 AGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGT 4741 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||| || || || || |||| ||||| || || || || || || || Sbjct 4740 CCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCC 4681 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| || || ||| || ||| | ||||| || || || || || | || Sbjct 4680 TTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTG 4621 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || ||||| || ||||| || ||||| Sbjct 4620 ATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 4583 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 134523 TCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 |||||||| |||||||||||| || ||| || ||| || ||||| || || || ||| Sbjct 4545 TCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAA 4486 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 || | || || || || || || || || || || || || || || || || | Sbjct 4485 ATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTTTACATTG 4426 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | || ||||| || || || || | ||||| || || || || | ||||| ||| Sbjct 4425 TCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACG 4366 Query 134703 AAAATTTGCAT 134713 ||||| ||||| Sbjct 4365 AAAATCTGCAT 4355 >seq3863 Length=8216 Score = 89.7 bits (98), Expect = 5e-13 Identities = 278/422 (66%), Gaps = 9/422 (2%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || |||||| | |||| || || || || || || || ||||||| | | | Sbjct 5185 CAGCACATGATCATGCGTGTTGCTGTAGGTATCTGGGGTGACAACATTGAGCGAGTCATC 5244 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 ||||| ||| | | |||||| ||| || || ||||| || || || | || | Sbjct 5245 GAAACCTACAACCTTATGTCTAGCAAATTCTTCACACACGCCTCCCCGACGCTTTTCAAC 5304 Query 7684 GCGGGCACAAACGC-GCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742 || |||||| ||| | |||| ||||| || || || || | ||| || ||||| Sbjct 5305 GCCGGCACAC-CGCAGGCTCAGTTGTCGTCATGCTTCCTGGTTGATATGAAGGACGACAG 5363 Query 7743 CATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCAAATACGGC-GGC 7800 ||| || || || ||| |||| || | || ||| |||| || ||||| | ||| ||| Sbjct 5364 CATTGAGGGAATCTACGACACCCT-CAAGACTTGTGCCATGATCTCCAAG-ATGGCTGGC 5421 Query 7801 GGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAAC 7860 || || ||||| ||||| | | | || |||| || | |||| |||||| Sbjct 5422 GGTATCGGTCTCAACGTCCATCGCATCCGTGCCACTGGCTCCTATATCGCCGGTACCAAC 5481 Query 7861 GGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTA 7920 || | | | ||| | | |||||| |||| |||||||| ||| | | || | || Sbjct 5482 GGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAACAACACAGCTCGCTACGTC 5541 Query 7921 GACCAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCG 7977 |||||||| || || |||| || ||| ||||||||| | |||||||||||||| Sbjct 5542 GACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCGTGGCACGCA 5601 Query 7978 GA 7979 || Sbjct 5602 GA 5603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505356862569000