Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734315.1_202014-07-28] 6,575 sequences; 37,493,836 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq6086 190 4e-43 seq1582 159 7e-34 seq2603 134 3e-26 seq4491 113 9e-20 seq756 86.0 1e-11 >seq6086 Length=29700 Score = 190 bits (210), Expect = 4e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| || | || ||| ||||||||||||||||| | Sbjct 4810 ACCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 4751 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| |||||||| | || || || || ||||||| || |||||||| || Sbjct 4750 CAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGG 4691 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||||||||||||| | ||| || | || || ||||| |||| ||||| Sbjct 4690 AATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGAC 4631 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct 4630 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 4583 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | || || || || || ||||| |||| Sbjct 5038 ACCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGA 4979 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | |||||||| || || || || |||||||||||||||||||||||| ||| Sbjct 4978 CAGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGG 4919 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||||| ||||||| ||| ||| | ||||| ||||| |||| ||| || Sbjct 4918 GATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAAC 4859 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| ||||| || || || || | ||||| ||||| || ||||| Sbjct 4858 TTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 4811 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| |||| ||| | ||||| || ||||||||||||||||| | | Sbjct 4581 CCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 4522 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || ||||| || || || || || || || | ||||||||||| ||| Sbjct 4521 AGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGA 4462 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| |||||||| | ||||| | ||||| || || || | ||||| Sbjct 4461 ATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACC 4402 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || |||||||| || || | || || ||||| |||||||| Sbjct 4401 TCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 4355 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || || || || | || || || || |||||||||||||| | | Sbjct 4353 CCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAA 4294 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || ||||| ||||| || |||||||| || | ||| |||||||| || Sbjct 4293 AGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGG 4234 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| |||||||| | || ||| | ||||| || || || || || Sbjct 4233 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACC 4174 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 4173 TCGAGGGTGATGGTCTTGCCAGT 4151 >seq1582 Length=39032 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | ||||| || || |||||||||||||| | Sbjct 25025 ACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 24966 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||| ||||| || || || |||||||||||||| || || ||||| || Sbjct 24965 CAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGG 24906 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || || | ||||| ||||| | || || Sbjct 24905 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCAC 24846 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 24845 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 24798 >seq2603 Length=12175 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || || ||||| ||||| | || || || |||||||| Sbjct 6361 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 6420 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| ||||||||| ||||| ||||||||||| || ||||| | || || | ||| Sbjct 6421 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 6480 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||||||| | ||||| || | ||||| ||||| || |||| |||||| ||||| Sbjct 6481 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 6539 >seq4491 Length=22567 Score = 113 bits (124), Expect = 9e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 315651 GTGACTAATCACCACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAG 315710 |||| |||| | | || ||||| |||| ||||| ||||||| | || ||||||||| Sbjct 17008 GTGAGTAATGATGATGACACCACCCTCGAACTTCTTGAGCGCCTTGGACAGGGCACCGAG 16949 Query 315711 ACTCTCGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCA 315770 | || ||||||| ||||||| ||||||||||||||||| | ||| || | ||||| Sbjct 16948 AGAGTCACGGTCCAAGTAGTTGGTAGGCTCATCAAGAACGATCAAGTGAGGACGCTGCCA 16889 Query 315771 TAGAGC-GGCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAG 315829 |||| |||| | | |||| ||| | || ||||||||||| ||||| ||||| | Sbjct 16888 -CGAGCAGGCGGCAAGGACGACCTTGACACGCTGTCCACCAGACAGACCACGCATGCGCG 16830 Query 315830 AATGAG 315835 | |||| Sbjct 16829 AGTGAG 16824 Score = 87.8 bits (96), Expect = 4e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088 ||||| || || | ||| |||| || || | ||| || || ||||| || | ||| Sbjct 15594 GGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGGTGGACTTTCCGGAACCG 15535 Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGA 317148 ||||||||||||||||| || || | || ||| ||| | | |||| | ||| ||| Sbjct 15534 TTGGGGCCGCAAAGACCGTAACGCTGGCCACGCTTGAGACGGAGATGGGTCTGGTTGAGA 15475 Query 317149 AGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 |||||||| |||| || || || |||||| || | ||||||||||| || Sbjct 15474 AGAATCTTGGCACCGTAGGCGAGCGAGAACGTGCAGTTGCACAGGTCCTCACC 15422 >seq756 Length=7796 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 230229 GGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTG 230288 |||||||| || | || ||| ||| || || || || || ||||| | || | || Sbjct 354 GGCATGAACGCCAACCTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTC 295 Query 230289 GCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATT 230348 || || || ||||||| || || ||| ||||| |||| |||||||||| ||| Sbjct 294 GCCCTGGGAAACGAGAAGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATC 235 Query 230349 TCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGT 230408 |||||| || || || ||||||||||| || || || |||| || |||| ||||| Sbjct 234 TCACTCGGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTACCAAAAAGCCGGT 175 Query 230409 GT 230410 || Sbjct 174 GT 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046651020400050