Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734335.1_202014-07-28] 6,061 sequences; 37,013,264 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq4300 134 1e-26 seq3680 125 7e-24 seq2802 125 7e-24 >seq4300 Length=29678 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || ||||| | ||| ||||||||| |||||||| ||| Sbjct 4558 GCCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 4499 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| |||||||| || ||| | || | || || ||||||||||| Sbjct 4498 AAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGG 4439 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| ||| ||| | | || | ||||||| |||||||| Sbjct 4438 AATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGAC 4379 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||||| || || || || || ||||| ||||||||||||||| Sbjct 4378 CTCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCATG 4330 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || || || | || || |||||||| |||||||| ||| | Sbjct 4785 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 4726 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| | |||||| || ||| |||| | ||||| ||||||||||| Sbjct 4725 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 4666 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || || | | || | || || | ||||||| Sbjct 4665 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACC 4606 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || | ||| || ||||| ||||||||| Sbjct 4605 TCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 4558 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| | || | ||||||||||| ||||| |||||||| | Sbjct 5013 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 4954 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | ||||| ||||||||||| || |||| ||||| || ||||| || ||| Sbjct 4953 AGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 4894 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| | | || |||| | || | || || | || || | Sbjct 4893 ATACCCTCCTTGTC-TTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAAC 4835 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | |||||| ||||| || || || ||||| || ||||| Sbjct 4834 TTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 4787 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || ||||| | || | || |||||| || |||||||| ||| Sbjct 4330 GCCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGA 4271 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || |||||| || |||||||| || | || | |||||| ||||||||||| Sbjct 4270 AAGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGG 4211 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| ||| ||||| | || | |||||| | ||||| | Sbjct 4210 GATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCAC 4151 Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | ||| || || || Sbjct 4150 CTCGAGGGTGATGGTCTTGCCAGT 4127 >seq3680 Length=8156 Score = 125 bits (138), Expect = 7e-24 Identities = 405/618 (66%), Gaps = 13/618 (2%) Strand=Plus/Plus Query 145869 CCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCG 145928 |||| ||| | ||||||||| || | ||||| || |||| ||| || ||||||| | Sbjct 2339 CCTCGAACTCTTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGG 2398 Query 145929 ACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACA 145988 ||| ||||||| | ||||||| ||| |||| ||| || | ||| || ||| | Sbjct 2399 TCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGA 2458 Query 145989 TCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTAT 146048 || ||| || || ||||| || ||| | | | | || | ||| Sbjct 2459 ACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGA-ACTCG 2517 Query 146049 A-GATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCA 146104 | || || ||||||||||| |||| |||| ||| | ||| || || ||| ||| Sbjct 2518 AAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCA 2577 Query 146105 CCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTG 146164 |||||||| |||| || | ||||||| || || |||| |||||| | | |||| | Sbjct 2578 CCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTC 2637 Query 146165 GCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACG 146224 | |||||| ||| | || || ||| || || | || ||| || || | Sbjct 2638 GAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGACGTTGAGA 2697 Query 146225 CCGAGACCGCC-GCCGTACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGC 146282 |||| |||||| ||| | |||||| || ||| | |||| ||| || |||||||| | Sbjct 2698 CCGATACCGCCAGCCAT-CTTGGAGATCATGGCACAAGTC-TTGAGGGTGTCGTAGATTC 2755 Query 146283 CGTCAATGCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGG 146340 | |||||||| ||| |||| || | | ||| ||||| || ||| ||| ||| ||| Sbjct 2756 CCTCAATGCTGTCGTCCTTC--ATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGG 2813 Query 146341 CGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG 146400 || || || ||| | ||||||| ||||| || || | ||| | ||| | Sbjct 2814 TGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAAGGTT 2873 Query 146401 ATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAG 146460 || |||||||| | | ||||| ||| || || || | ||| || ||||||| Sbjct 2874 GTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCAGATACCTACAGCAACACGCATGAT 2933 Query 146461 CATGTGTTGGGGCCGCTC 146478 |||||| || |||| ||| Sbjct 2934 CATGTGCTGTGGCCTCTC 2951 Score = 105 bits (116), Expect = 6e-18 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| ||||||||||| | |||||| || || | ||| || || |||| Sbjct 1528 TTGACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGC 1587 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| ||||| |||||||| | || | || || |||||| || || Sbjct 1588 TCAAAGCACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACG 1647 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | || ||||| | || || | |||||||| |||| || | |||| ||||| Sbjct 1648 AGCAAGCTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCAG 1707 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT 145283 || | ||| | |||| ||||||||||||||| | ||| |||| Sbjct 1708 AGGTCTGAAGGCTTGACGTTCCACATGTCGTACTGGAGAATTCCCT 1753 >seq2802 Length=38983 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| | || | ||| |||||| || |||||||| ||| | Sbjct 25030 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 24971 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | |||||| ||||||||||| || |||| || |||||||||||||| ||| Sbjct 24970 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 24911 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || ||| | ||||| | Sbjct 24910 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACC 24851 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || || || || || || || ||||| |||||||||| Sbjct 24850 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 24802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471977039130240