Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734335.1_202014-07-28] 6,061 sequences; 37,013,264 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq4300 125 6e-24 seq2802 100 2e-16 seq1583 98.7 8e-16 >seq4300 Length=29678 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | ||||| ||||| |||| || ||||| ||| | | Sbjct 4787 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 4846 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | ||||| ||| |||||||||||||||||||| || || || ||| Sbjct 4847 GACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAA 4906 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| ||||| ||| | |||||| | ||| | || |||||||| Sbjct 4907 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGAAGAACCCTGTCTGATTACAAT 4966 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 4967 ATTCAGAAGGAGTCGAC 4983 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || ||||| | || || || ||| | || | || || || || || Sbjct 4331 ATGCAGATTTTCGTCAAAACCCTCACTGGCAAGACGATTACCTTGGAGGTCGAGTCCTCC 4390 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || || || || ||||||||||||||||| || || ||| Sbjct 4391 GATACCATCGACAATGTAAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 4450 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| ||||| || || || || ||| | ||||| || ||| | ||||| |||||| Sbjct 4451 CAACGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACAAC 4510 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || ||||| || |||| | ||||| || Sbjct 4511 ATCCAAAAGGAGAGCACCCTCCATTTGGT 4539 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||||| || || || || |||| | || || || | | Sbjct 4559 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 4618 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | ||| || || |||||||||||||||||||| || || ||| Sbjct 4619 GACACGATTGACAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAA 4678 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||||| |||||| ||||| | ||||| |||||| Sbjct 4679 CAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAAC 4738 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || || |||| |||| || ||| Sbjct 4739 ATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGGT 4786 Score = 95.1 bits (104), Expect = 1e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || ||||| | | ||||||| | ||| | |||| Sbjct 4127 ACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACGTCAAGTCG 4186 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || || || ||||| |||||||| ||||||||||| Sbjct 4187 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGCAAG 4246 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGA 22409 || | ||||| || || | ||||| |||||||| || || || Sbjct 4247 CAACTCGAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGA 4293 >seq2802 Length=38983 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| ||||| ||||| | | | Sbjct 24804 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 24863 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || || |||||||||||||| || || || || Sbjct 24864 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 24923 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||||||||| ||| | ||||| | | ||| | ||||| |||||| Sbjct 24924 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 24983 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||| | || | || |||| |||| || ||| Sbjct 24984 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGGT 25031 >seq1583 Length=24253 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| ||||| || || ||||| |||||||| ||||| ||||| Sbjct 5721 AAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTTATCTTTGCTGGCAAG 5780 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||||| ||||| ||| || ||||||| |||||||| || || Sbjct 5781 CAGTTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAA 5824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419696995348465