Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734335.1_202014-07-28] 6,061 sequences; 37,013,264 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq4300 170 4e-37 seq2802 152 9e-32 seq1583 129 1e-24 seq3757 127 4e-24 seq5218 89.7 9e-13 >seq4300 Length=29678 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| || || || || ||||||||||| || ||||| Sbjct 4785 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 4726 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| || ||||| || |||| |||||||| || ||| Sbjct 4725 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 4666 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| | || || || || ||||||| || || || Sbjct 4665 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACC 4606 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || ||||| | ||||||||||| |||||||| Sbjct 4605 TCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 4559 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || || ||||| || || || || ||||| || Sbjct 5013 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 4954 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || || ||||| || | |||||| || || || || | | ||||||||| || || Sbjct 4953 AGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 4894 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||||| |||||| ||||| ||||||| ||||| ||| Sbjct 4893 ATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACT 4834 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||||| || || || ||||||||||| || ||||| Sbjct 4833 TCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 4787 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||| || || ||| ||| ||||||||||| || ||||| Sbjct 4557 CCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 4498 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || || || | |||||| || ||||| || || | ||||||||| || ||| Sbjct 4497 AGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGA 4438 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||| || |||||||| || | || || || Sbjct 4437 ATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACC 4378 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || || || || |||||||| |||||||| |||||||| Sbjct 4377 TCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 4331 >seq2802 Length=38983 Score = 152 bits (168), Expect = 9e-32 Identities = 174/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| || | ||| || ||| ||| || |||||||| || ||||| Sbjct 25030 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 24971 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||| || || || | |||||| ||||| || || | | || ||||| || || Sbjct 24970 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 24911 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || ||||| | |||||| ||||||||||| ||| || || || Sbjct 24910 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTC-GCTCGACTCCAC 24852 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || | |||||| || || |||||||||||||||||||| |||||||| || Sbjct 24851 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 24801 >seq1583 Length=24253 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || |||||||| || | || || || |||||||| || || || || Sbjct 5824 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 5765 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | |||||||| || ||||| || |||||||| |||||||| | ||| || ||| Sbjct 5764 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 5705 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || |||||||||||||| || || || || ||||| ||||| Sbjct 5704 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 5646 >seq3757 Length=22574 Score = 127 bits (140), Expect = 4e-24 Identities = 662/1041 (64%), Gaps = 48/1041 (5%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | || || |||||| |||||| || || ||| |||||| Sbjct 16430 CGCCACTGGATGTACTCGGAAGGAGTGCTGTCCAAGTGGTTGTCGATGTGGGCGAAAGCG 16371 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| | ||| || || || ||||| |||| | | || ||| || Sbjct 16370 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCAGCAGTGGGG 16311 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 ||| || || ||||| |||||||| |||| ||| || ||||| ||||| ||||| Sbjct 16310 ATAAGCTCACCAGTCAGGACGTTGATGAGAGTAGACTTTCCGGCACCGTTGGGACCAATG 16251 Query 225161 ACGCCAATCCGGGATG--ACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGGC 225218 ||| |||| ||||| | | ||| ||| || | | || ||||| || ||| Sbjct 16250 ACGGCAATACGGGAACCAAGAGAGCA--CTGGAAGGTGATGTCGCTGA-----TCTGGGG 16198 Query 225219 CAGTTTGGTAAGCAAAGGCCACGCCAC--GCAG--CTTCATGATGGCACGGT-------- 225266 | |||| || | ||| | || | || | || || |||||||| Sbjct 16197 C---TTGG--AGGTA---CCAGGGTACTGGAAGTCCATCTTGGTGGCACGGAGAATGGCC 16146 Query 225267 ----CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACC 225322 |||||| | | |||||| ||||| |||||||||||||| ||| || | Sbjct 16145 TTGGCCTTGGTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAAGGTGAACTCCATCTCA 16086 Query 225323 GCGTCCTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGG 225382 | | | || ||||||||||| ||| ||| | ||| ||||| | |||| Sbjct 16085 GAGGCACCGAGCTCGTAGTAAGACTTGGCCGAGGGGCACTTCTTGACGAACTCCTTCAGG 16026 Query 225383 TTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACAC 225441 || || ||| | ||||||||| || |||| ||||| || ||| | ||| || Sbjct 16025 TTACCACGGTAACGCTTGAGCTTGAAACGCT---CGTAGTGAACGATGTGCTG-GCAGAC 15970 Query 225442 TGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCT 225500 ||| ||||||| |||||||| ||||| |||||||| | || | | || | | Sbjct 15969 GTTGTCGAGGAAGCTGGAGTCGTGCGACACGATGATGGAGGTGCAAG---GGGAGTTC-T 15914 Query 225501 TGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCA 225560 ||||| | ||||| ||||| | ||||||| |||||| || || ||||| | Sbjct 15913 GGAGGTACTCCTCAAGCCACTTGACGTTCTTCACGTCCAAGTGGTTGGTGGGCTCGTCGA 15854 Query 225561 GAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGC 225620 | | ||| || |||| | | || || ||| || |||| ||||||||| ||||| | Sbjct 15853 GCAACAGAATATCAGGAGCCTCGAAGACGGCACGGCACAGAGCCAGCTTCATCTTCCAAC 15794 Query 225621 CCCCGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGA 225680 | ||||| || | | ||| | |||| | | | ||| || ||| |||| || Sbjct 15793 CACCGGAAAGAGCGGTGATCTCACCAGAAACCATGGAGTCGGTGAAACCGAACTCGTTGA 15734 Query 225681 GCGTCTGGATAATGCGCTCGGGAG-AGCTGCGAGC--GGCAACGTTGGGGTCGGACGAGA 225737 | || || | | |||| | | | | | || | ||| | | | | | | Sbjct 15733 GGCGCTTGACGACGTCCTCGCGGGTAACCGAGACCTTGGCCTCCTCCAGCTTCTTCATGG 15674 Query 225738 GGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCG 225797 | || |||||| || | | ||| | ||||| |||||| || ||| | || | Sbjct 15673 TCCAGTCGATGGTGGTCATCTCAGTGTCAGCAGAGTCAAGGTCGTGCTCGACGAAGACGG 15614 Query 225798 TCCGGAGCT-GAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGC 225856 || || || | || | |||||| ||||| | ||| | || || || || | Sbjct 15613 TCTTGACCTCGCTCTGCTT-GGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATG 15555 Query 225857 AGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATG 225916 ||||| ||| || | |||||||| ||| || |||||| | | || ||||||| Sbjct 15554 AGGGTGGACTTTCCGGAACCGTTGGGGCCGCAAAGACCGTAACGCTGGCCACGCTTGAGA 15495 Query 225917 TTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCG 225976 ||| | || ||| || || |||||| |||| ||||| || |||||| ||| | | Sbjct 15494 CGGAGATGGGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCGAGCGAGAACGTGCAGTTG 15435 Query 225977 CACAGGTCCTCACCCTCCTCG 225997 ||||||||||||||||||||| Sbjct 15434 CACAGGTCCTCACCCTCCTCG 15414 >seq5218 Length=5724 Score = 89.7 bits (98), Expect = 9e-13 Identities = 259/394 (66%), Gaps = 10/394 (3%) Strand=Plus/Plus Query 176892 ACAATTGGAGTCACGAAGCGCTTGAGGAACCCGGGGATCTCGAGCAGCGACGGGAACTGT 176951 |||| ||||| | ||| || || ||| ||||||||| ||||| || |||||||| Sbjct 3401 ACAACCGGAGTGATGAACTCCTGGAAGAAGTCGGGGATCTGCAGCAGAGAAGGGAACTGC 3460 Query 176952 GCATGGAAAAAGTTCAGCACTAGACCAGCAATATGTGAGCCGTCAACGTCCTGGTCTGCC 177011 | |||| ||||| | | ||||| ||||| ||||| ||||| || ||| Sbjct 3461 ACTTGGAGGAAGTTTATGAGAAGACCCTTGATATGACTTCCGTCGTGATCCTGATCAGCC 3520 Query 177012 ATAATAATCACAGACCCGTACCGAAGAGAGGACGCGTCCTTGTAGTTCACACCATTGCG- 177070 || || |||| | || || |||||| | ||| |||| | ||| ||| | Sbjct 3521 ATGATCATCAGATGACCATATCGAAGACCCTTGGTGTC--TGTA-TACACCTGTTTGTGT 3577 Query 177071 --GAGACCGAGAATTTGTTTGATGGCAGTAATCTCGGCGTTGTTAGTAATACTAGACACA 177128 |||||| || | |||||||| ||||| ||| || || | | Sbjct 3578 TTGAGACCCAGGAACTGTTTGATATTTTGGATCTCCTTGTTCTTCAGGATCTGATCTATG 3637 Query 177129 GACGCATCACGGACATTCAGTAGCTTACCACGGAGGGGGAAAATTCCGTAGCGATCCCGA 177188 || ||||| || |||||||| | |||||| | ||||||||| | ||| ||| || || Sbjct 3638 GATGCATCTCGCACATTCAGCATCTTACCCCTGAGGGGGAACACGCCGATGCGGTCTGGA 3697 Query 177189 CCCACGACAGCAAGGCCAGCTGTGGCAAGCGTGGCGGCAGAGTCACCCTCTGTCAAAATG 177248 ||| || ||| ||||||| || || ||||||||||||||| ||||| | Sbjct 3698 TCCAGGATGGCACGGCCAGCAACCGCCAGACCACGGGCAGAGTCACCCTCAGTCAACACT 3757 Query 177249 AGCGTGCACATTCCAGA--GTGCTTCGTGCCCGC 177280 ||||||||| || || |||||||||||| || Sbjct 3758 AGCGTGCAC--TCATGACCGTGCTTCGTGCCTGC 3789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921552575582920