Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734335.1_202014-07-28] 6,061 sequences; 37,013,264 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2799 257 2e-63 seq4300 205 1e-47 seq2802 143 4e-29 seq4155 136 5e-27 seq5908 131 2e-25 >seq2799 Length=37409 Score = 257 bits (284), Expect = 2e-63 Identities = 436/628 (69%), Gaps = 9/628 (1%) Strand=Plus/Plus Query 195363 AGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATA 195422 |||||||| | |||||||| || ||||| ||||| || || | ||| || || || |||| Sbjct 9395 AGATTATCGCCAATGACCAGGGTAACCGAACAACCCCGTCCTTCGTGGCGTTCACGGATA 9454 Query 195423 ATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTG 195482 || ||||| | |||||||| || || || ||| ||||||||||| ||| || | Sbjct 9455 CCGAGCGTCTGATCGGAGATGCGGCCAAGAACCAGGTCGCTATGAACCCCCACAACACCG 9514 Query 195483 TCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATA 195542 |||| ||||||||| | | |||||||||||||| || || | ||||| | ||| | Sbjct 9515 TCTTCGACGCGAAGAGGTTGATTGGTCGCAAGTTCTCCGACGCTGAGGTCCAGGCCGACA 9574 Query 195543 TAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTG 195602 | ||| ||| | | | ||| | || | || ||| |||||| | ||| | || | Sbjct 9575 TGAAGCACTTCCCCT-TCAAGGTCGTCGAGAGGT--CTGGCAAGCCTGTCATTGAGGTCG 9631 Query 195603 AATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTA 195662 | || | || ||| || || || |||| || || || || || ||||| |||| | Sbjct 9632 AGTTCAAGGGAGAGTCAAAGCAGTTCACTCCTGAGGAGATCTCATCCATGGTCTTGACCA 9691 Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 ||||| |||||||| || |||| | | ||| || || || | || || || || | Sbjct 9692 AGATGCGTGAGACTGCTGAGTCTTACCTTGGTGGCACCGTCAACAACGCTGTCGTCACCG 9751 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || || ||||| || ||||| || | | ||||| | Sbjct 9752 TCCCCGCCTACTTCAACGACTCGCAGCGTCAGGCTACCAAGGATGCCGGTCTCATTGCTG 9811 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 |||| ||| || | || ||||| || || || || || || || || || ||||| | Sbjct 9812 GTCTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCCGCCATCGCCTACGGTCTTG 9871 Query 195843 ACAAGAACAAGGACGAAGATAA---AAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 ||||| |||| ||| | | | || || | || || ||||| ||||||||||| | Sbjct 9872 ACAAG---AAGGTCGAGGGTGAGCGCAACGTGCTTATTTTCGATCTTGGTGGTGGTACTT 9928 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 | ||||| || || || | ||||| | ||||| ||||| || ||| | || ||||||| Sbjct 9929 TCGATGTGTCGCTCCTTACCATTGAGGAGGGTATCTTCGAGGTCAAGTCCACCGCTGGTG 9988 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGA 195987 | || || | |||||||| || || || Sbjct 9989 ACACCCACTTGGGTGGTGAGGACTTTGA 10016 Score = 233 bits (258), Expect = 3e-56 Identities = 545/820 (66%), Gaps = 3/820 (0%) Strand=Plus/Plus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 || || ||||| || | ||||| || || ||||| || || ||||| ||||| | || Sbjct 10154 GCCCTCCGTCGTCTGCGCACTGCTTGCGAGCGTGCGAAGCGCACTCTTTCTTCCTCTGCC 10213 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || || | ||||| || ||| ||| || || ||||||||||| || | || || Sbjct 10214 CAGACCTCCATCGAGATCGACTCGCTGTACGAGGGTATTGACTTCTACACCTCGATCACT 10273 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 ||||| ||||| || ||| | | || |||| | || | |||||||| Sbjct 10274 CGTGCCCGTTTCGAGGAGCTTTGCCAGGACCTGTTCCGCTCCACCCTGCAGCCTGTTGAC 10333 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | || | || || ||||| || ||| | ||||| | || || ||| | || || Sbjct 10334 CGTGTCTTGACCGATGCCAAGATCGACAAGGCCCAGGTTCACGAGATCGTCTTGGTCGGC 10393 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360 || || ||||||||||| || || || | || | || |||||| || || Sbjct 10394 GGTTCCACCCGTATTCCCCGTATCCAGAAGCTCATTACCGACTACTTCAACGGCAAGGAG 10453 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 ||||| | |||||||| || || || || || || ||||| ||||| |||||||| Sbjct 10454 CCCAACAAGTCCATCAACCCTGACGAGGCTGTCGCCTACGGTGCTGCCGTCCAGGCTGCC 10513 Query 196421 ATTCTCTCAGGTGTTGACAATAATAA--CGTCCAA-GATCTTCTGCTACTTGATGTTGCA 196477 || || || |||| || || | |||| || ||||||| || || |||||| Sbjct 10514 ATCCTTTCGGGTGACACCAGCTCCAAGTCCACCAACGAGATTCTGCTGCTCGACGTTGCA 10573 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 || | || || ||| | || || || |||||| | ||||| || | ||| | ||| Sbjct 10574 CCGCTCTCGCTCGGTATCGAGACTGCTGGTGGTATGATGACCAAGCTCATTCCCCGTAAC 10633 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGT 196597 || || || || || ||||| | ||||| || || | || || || || || ||| Sbjct 10634 ACCACCATCCCCACCAAGAAATCCGAGGTCTTCTCCACCTTCTCGGACAACCAGCCTGGT 10693 Query 196598 GTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGA 196657 || | ||| || || || || || || ||| || | ||||| ||| | || || || Sbjct 10694 GTGCTTATCCAGGTCTACGAGGGTGAGCGCCAGCGCACCAAGGACAACAACCTGCTGGGC 10753 Query 196658 ACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGC 196717 | ||||| | || || ||||| | || || | |||||||| ||||| | ||| | Sbjct 10754 AAGTTCGAGCTTACCGGCATTCCCCCGGCTCCTCGCGGTGTTCCCCAGATCGAGGTTACC 10813 Query 196718 TTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAA 196777 ||||| | ||||| || ||||| | |||||| | |||| || |||| ||||||| Sbjct 10814 TTCGACCTGGACGCCAACGGAATCATGAACGTCTCCGCTGTTGAGAAGGGCACTGGCAAG 10873 Query 196778 TCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGT 196837 | | ||||| || ||||| |||||||| || ||||| |||||||| || || || Sbjct 10874 ACCAACCAGATTACCATCACCAACGACAAGGGCCGTCTTTCCAAGGAGGACATCGAGCGC 10933 Query 196838 ATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 ||| || || || || |||| || ||| || || |||| Sbjct 10934 ATGCTTGCTGAGGCCGAGAAGTTCAAGGAGGAGGATGAGG 10973 >seq4300 Length=29678 Score = 205 bits (226), Expect = 1e-47 Identities = 185/233 (79%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || ||||| || ||||| ||||| ||||| ||||| | Sbjct 4782 GTGGTATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAAT 4841 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | |||||||||||||| ||| ||||| | ||||||||||| ||||| || || || || | Sbjct 4842 CTTCAGACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTG 4901 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || ||||| | || ||||| || || ||||| || |||||| | ||||| |||||| Sbjct 4902 ACCAACAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGAAGAACCCTGTCTGATT 4961 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| |||| |||||||| ||||| |||||||| || | ||||| || ||| Sbjct 4962 ACAATATTCAGAAGGAGTCGACTCTGCACCTTGTGCTCCGTCTTCGTGGCGGT 5014 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 ||||| || || |||||||||||||| ||||| || || ||||| ||| |||| | Sbjct 4127 ACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACGTCAAGTCG 4186 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || ||||| || || || || || || || || ||||||||||| || || Sbjct 4187 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGCAAG 4246 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 || || || || || || || || | || |||||| | || |||||| |||||| ||| Sbjct 4247 CAACTCGAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGAGAGTACTCTCCAC 4306 Query 172066 CTTGTTCTAAGGCTTCGGGGTGG 172088 || || || | || || ||||| Sbjct 4307 CTCGTGCTCCGCCTCCGTGGTGG 4329 >seq2802 Length=38983 Score = 143 bits (158), Expect = 4e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||||| || || || ||||||||||| ||||| |||||| Sbjct 24804 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 24863 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||||| || || ||||| || || || || || ||| Sbjct 24864 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 24923 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | || ||||| || || |||||||| || || | ||||| | || |||||| Sbjct 24924 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 24983 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 | || |||||| || || ||||| || || | || || ||||||| Sbjct 24984 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGGTG 25032 >seq4155 Length=12973 Score = 136 bits (150), Expect = 5e-27 Identities = 327/492 (66%), Gaps = 6/492 (1%) Strand=Plus/Minus Query 195496 GCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTC 195555 ||||||||| |||||||||||| |||| ||| | ||||| | ||||| ||| ||| | Sbjct 11424 GCGTCTTATCGGTCGCAAGTTTACGGACAAGGATGTCCAGCAAGATATCAAGCACTTCCC 11365 Query 195556 TTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGA 195615 || | ||||| | | | || ||||| | || || || | | ||||| Sbjct 11364 CTACAAGGTTGTGAACAAGGGAG--GA-AAGCCCGTTGTTTCGGTCGATGTCAAGGGTGA 11308 Query 195616 GAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGAC 195675 || || || || | ||||| || | ||| | ||| | ||| |||||||||||| Sbjct 11307 GACCAAGCAGTTCACCCCCGAGGAGGTCTCGGCCATGATCTTGGGCAAGATGAAGGAGGT 11248 Query 195676 TGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTT 195735 ||| || | | | |||| || | || | | || || || || || || || ||||| Sbjct 11247 TGCCGAGGCCTACTTGGGCAAGAAGGTTACCCACGCCGTCGTCACCGTTCCCGCGTACTT 11188 Query 195736 CAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCT 195795 || || || | ||||||||||||||||| | || |||||| ||||| ||| ||| Sbjct 11187 CAACGACAACCAGAGGCAGGCGACAAAGGACGCCGGTGTTATTGCCGGTCTCAACGTTCT 11128 Query 195796 TAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGA 195855 | | ||| | || || || || || || || | || || || |||||||||| | | Sbjct 11127 TCGTATTGTTAACGAGCCCACGGCTGCCGCTTTGGCGTACGGCCTGGACAAGACC---GG 11071 Query 195856 CGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCT 195915 ||| || || | | | | | || || |||||||| || || || || || || || Sbjct 11070 CGAGGAGAACCAGATCATCGTGTACGACCTGGGTGGTGGCACCTTCGACGTTTCCCTCCT 11011 Query 195916 CAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGG 195975 || || ||| | ||||| || ||| || || ||||| || || || ||||| Sbjct 11010 TTCGATCGACAACGGTGTTTTCGAGGTCCTGGCCACCGCCGGTGACACCCACCTTGGTGG 10951 Query 195976 TGAAGATTTCGA 195987 ||| |||||||| Sbjct 10950 TGAGGATTTCGA 10939 Score = 84.2 bits (92), Expect = 3e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 195311 GATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATC 195370 ||| | || || || ||||| ||||| ||||| ||| || | || |||||| || Sbjct 11685 GATCTGGGCACCACATACTCTTGTGTCGGTGTTATGCAGAAGGGCAAGGTTGAGATTCTC 11626 Query 195371 CCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGT 195430 || |||||||||||||||| || || || ||||| ||||| || || | || | Sbjct 11625 GTCAACGACCAAGGAAACCGTATCACCCCCTCATACGTCGCCTTCACCGACGACGAGAGG 11566 Query 195431 CTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGAC 195490 || || ||||| ||||| || || ||| | || |||||| ||| || |||||||| Sbjct 11565 CTAGTAGGAGACGCCGCCAAGAACCAGGCCGCCTCGAACCCGTTCAGGACCATCTTTGAC 11506 Query 195491 G 195491 | Sbjct 11505 G 11505 >seq5908 Length=3585 Score = 131 bits (144), Expect = 2e-25 Identities = 503/779 (65%), Gaps = 17/779 (2%) Strand=Plus/Minus Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 |||||||||||| ||| || | || || || | || | | || ||| | |||| Sbjct 2725 AGATGAAGGAGATTGCCGAGGCCAAGATCGGCAAGAAGGTTGAGAAGGCCGTTATCACTG 2666 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || ||| | || |||||||| | ||| || | | Sbjct 2665 TCCCGGCCTACTTCAACGACAACCAGCGTCAGTCCACCAAGGACGCCGGTGCCATCTCTG 2606 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 | || ||| || | || ||||| || || || || ||||| ||||| || ||||| | Sbjct 2605 GCCTTAACGTCCTCCGTATCATCAACGAGCCCACTGCTGCTGCCATTGCCTACGGTCTCG 2546 Query 195843 ACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 | |||| || | || || || |||||| |||||||| |||||||| | Sbjct 2545 GCTCCGGCAAGTCTGAGAAGGAGCGCAACGTCCTGATCTACGATCTCGGCGGTGGTACCT 2486 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 | |||||||| || || || || | || ||| | ||| || |||||||||||||||| Sbjct 2485 TCGATGTCTCTCTCCTGAACATCCAGGGCGGTGTCTTCACCGTCAAGGCTACTGCTGGTG 2426 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTG-ATGAG 196018 | || || | ||||| | || ||||| | | | | | | | || | | || Sbjct 2425 ACACCCACTTGGGTGGCCAGGACTTCGACAC-CAACCTGTTGGACCACTGCAAGAAGGAC 2367 Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078 |||| | |||| ||||| || | ||||| || | | || || ||||| || | Sbjct 2366 TTCCAGAGGAAGACCAAGAAGGACCTGTCTGGTGATGCCCGTGCCCTCCGTCGTCTCCGT 2307 Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG--CTCAAACAATGGTTGAGA 196136 || || || || |||||||| | || || || | |||| | || || | |||||| Sbjct 2306 ACCGCTTGCGAGCGTGCCAAGAGGACCCTGTC--CAACGGCACCCAGACCACTCTTGAGA 2249 Query 196137 TTGATTCGTTGTTTGACGGAATTGACTTCTATACAAC-TATTACCCGTGCACGTTTTGAA 196195 | || ||| |||||||||| |||||| | | | || ||| | || || || Sbjct 2248 TCGACTCGCTGTTTGACGGTGAGGACTTC-AGCCTGCAGATCACCAGGGCTAAGTTCGAG 2190 Query 196196 GAGTTAAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTGAACAAGTACTTCGT 196252 ||| | ||| | || | ||| ||| ||| | || || ||| || || || Sbjct 2189 GAGCTCAAC-CAGACTGCTTT--CAAGGGTACCCTTGACCCCGTTACCCAGGTCCTCAAG 2133 Query 196253 GACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGT 196312 ||||| | || ||| | || || || || ||||| || |||||||| |||||| Sbjct 2132 GACGCTGGTGTCGACAAGGCCGCTGTCGACGAGATCGTCCTGGTCGGAGGATCTACCCGT 2073 Query 196313 ATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACG 196372 || || ||||| || || | || || || ||| || | | | || | Sbjct 2072 ATCCCCAAGATCCAGAAGCTTCTGTCCGACTACTTTGGAGGCAAGAAGCTCGAGAAGAGC 2013 Query 196373 ATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431 |||||||| || || || || ||||| ||||| ||||| ||||| | |||||| || || Sbjct 2012 ATCAACCCCGACGAGGCCGTCGCTTACGGTGCTGCCGTCCAGGCCGGTATTCTGTCCGG 1954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657812558699920