Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734335.1_202014-07-28] 6,061 sequences; 37,013,264 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2581 132 8e-25 seq3680 104 4e-16 seq5044 102 1e-15 seq1534 95.1 2e-13 seq5576 89.7 8e-12 seq4666 86.0 1e-10 >seq2581 Length=7537 Score = 132 bits (146), Expect = 8e-25 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 |||||||| ||||| |||||| |||||||||||||| |||| ||||| |||||| Sbjct 207 TACTCGCCAACGCGTTTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCCATA 266 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| ||||||| | ||||| ||||||| || || | |||| || | | Sbjct 267 AAATCGAATGGGTTGGTGGCACGGTAGACCTTCTCGTTTCCCAGGGCGACAAGAAGTCTG 326 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 || ||||| || ||||||||||| ||| ||| |||||||||||| | ||| || | Sbjct 327 TCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAGGAGGGCGCAG 386 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGA 794133 |||| || ||| | | |||||||| ||| |||| ||| || |||| Sbjct 387 GGCAACGCCTCCGTAAGAAACTCTTGCTCAATCTTGACAGCATCGA 432 Score = 86.0 bits (94), Expect = 1e-10 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 794587 TCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCG 794646 ||||||| ||| |||||||| ||||||||||| ||||| ||||| ||||| || || | Sbjct 824 TCCTTGATGTACGTGTCGATCAGGAGCGAGTAAGTCTCGGAGTGAATGTTCTCCATCATG 883 Query 794647 ATCTGGAAGCCATAAAAGCA 794666 ||||||||||| || ||||| Sbjct 884 ATCTGGAAGCCGTAGAAGCA 903 >seq3680 Length=8156 Score = 104 bits (114), Expect = 4e-16 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGC 2071860 ||||| || |||| |||||| | | | |||||||||| || | ||||| | Sbjct 2368 AGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTC 2427 Query 2071861 ATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTG 2071920 || ||||| || |||| || || || || || || || || |||||||||| Sbjct 2428 ATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTT 2487 Query 2071921 CCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980 ||||||||||| | |||||||| | |||| || || |||||||||||||| |||||| Sbjct 2488 CCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAG 2547 Query 2071981 CAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 ||||||||| || ||||||| ||| || Sbjct 2548 ATGGCAAAGGCACCGGGGCGCTTGTTGCCACC 2579 Score = 95.1 bits (104), Expect = 2e-13 Identities = 319/486 (66%), Gaps = 22/486 (5%) Strand=Plus/Plus Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310 |||||||| || ||||| || | | |||||| | | | || ||||| |||||||||||| Sbjct 1180 TGGTCGACAGTGAACTGAATCGGCTGGGCGGCTGCCTGCGTCCGCAGGTAGTACATGCCG 1239 Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCG-GCAT--TC 2069367 |||||||| || | ||| || | |||||||| ||||| || | ||| || Sbjct 1240 GTCTTGAGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGAT---CTTGCCCATGGTC 1296 Query 2069368 GGGACG-GCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGC 2069426 ||| || ||| || || ||||||||||||| |||||| | ||| | ||||| || Sbjct 1297 GGGTCGCGCA-TGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGC 1355 Query 2069427 CGCCATGT---CGATGGTCACGCGGTTG-GACACCTCCCACACGGTCTTGAACAGGGCCT 2069482 ||||| | ||| ||| || |||| || | |||||| || |||||| | || || Sbjct 1356 GGCCATCTGAACGACGGT-AC---GTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCT 1411 Query 2069483 TGAGATGCGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGA 2069542 || || | || | | | | ||| | ||| | ||||| | | ||||||| Sbjct 1412 TGGTATCCTCAGGGA--TGCTGG----CAATGTTCTGGATGGAGCCTCCCTCGGCGATGA 1465 Query 2069543 GGCGGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGC 2069602 |||| | |||| | |||||| || || | | || || || || | Sbjct 1466 TACGGTTCTTCATGTCGTCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGG 1525 Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGA 2069662 ||||||| || || ||||| | ||||| ||||| ||| |||||| || | Sbjct 1526 GGTTGACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGG 1585 Query 2069663 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 2069722 ||| | |||| ||||||| ||||| || ||||| | || || |||||| | || | Sbjct 1586 GCTCAAAGCACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAA 1645 Query 2069723 CGAGCA 2069728 |||||| Sbjct 1646 CGAGCA 1651 >seq5044 Length=12131 Score = 102 bits (112), Expect = 1e-15 Identities = 170/246 (69%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254 || ||||| ||||| || ||| || | || || || ||||||||| || | || || | Sbjct 752 CTCCCGCCAGGCCGACATAAGCTGGTGATTCTTGACGAGGCCGACAGCATGACATCTGGC 693 Query 2019255 GCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTG 2019314 || ||||||||||| | || ||||| | ||| ||||||| ||| | || || | Sbjct 692 GCACAGCAGGCCCTGAGGCGAACGATGGAGATCTACTCCAACACTACGAGATTCGCTTTC 633 Query 2019315 GCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGC 2019374 || |||||| ||| | |||| || |||| ||| || ||||| ||| | || Sbjct 632 GCGTGCAACCAGTCAAACAAAATCATAGAGCCCCTGCAGTCTCGATGCGCAATCCTCCGG 573 Query 2019375 TTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAA 2019434 | |||||||| || ||||||||| | | | || || | |||| ||||| ||||| Sbjct 572 TACGCGCGCCTGACGGACGCCCAGGTGGTCAAACGGCTACTGCAGATCATCGAGGCCGAG 513 Query 2019435 AAGGTC 2019440 |||||| Sbjct 512 AAGGTC 507 >seq1534 Length=45183 Score = 95.1 bits (104), Expect = 2e-13 Identities = 95/121 (79%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 2233091 GTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCGT-CAGACGAGGC 2233149 |||| ||| || |||||||| || ||||| |||||||| ||||| | ||| || || Sbjct 37906 GTCGGCTTCCCAACCGAGACGGTTTATGGTCTCGGCGCAGACGCCACACGCAG-CGCTGC 37964 Query 2233150 CGTACAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGCACGT 2233209 ||| | |||||| || |||||||| || |||||| |||||||| ||||||||||||| Sbjct 37965 CGTCAGGGGCATCTATGCTGCCAAGGGTCGGCCGTCCGACAACCCGCTCATCGTGCACGT 38024 Query 2233210 G 2233210 | Sbjct 38025 G 38025 >seq5576 Length=19854 Score = 89.7 bits (98), Expect = 8e-12 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 |||||||||||||||| || || ||||| || |||| || | || |||| ||||||| Sbjct 4522 TGCCGTCGGTGCCGTTCTTGAAGCCGACGGGGAACGATAGGCCAGAGGCCAGCTCGCGGT 4463 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCC 2175172 | | |||||||||||||||||| || || || ||||| Sbjct 4462 GAAGCTGGCTCTCGGTGGTGCGGGCACCGACTGCGCC 4426 >seq4666 Length=24732 Score = 86.0 bits (94), Expect = 1e-10 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| || |||||||||||||| || ||||||||| |||| || || ||| ||| Sbjct 15367 GTACTTGGTAACAGCCTTGGTACCCTCAGACACGGCGTGCTTGGCAAGCTCACCGGGCAA 15308 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 ||| || | || | |||||||||||| || Sbjct 15307 GATAAGCCTGACCGAGGTCTGGATCTCACG 15278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915601663785779