Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734345.1_202014-07-28] 7,027 sequences; 36,982,960 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2950 113 4e-20 seq2869 93.3 4e-14 >seq2950 Length=29710 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | ||||| ||| |||||||| ||||||| || || || Sbjct 24853 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 24794 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| || |||| | ||| ||||| || || || || ||||| Sbjct 24793 GACACAATCGACAACGTCA---AATCAAAGATTCAA-GACAAGGAGGGTATCCCGCCTGA 24738 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| || | || ||||| ||||| || | || |||| | || || ||||| Sbjct 24737 CCAACAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGAAGAACCCTGTCTGATTA 24678 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||| || || || || || || | ||||| Sbjct 24677 CAATATTCAGAAGGAGTCGACTCTGCACCTTGTGCT 24642 Score = 102 bits (112), Expect = 7e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| || || ||||||| | || || ||||| || Sbjct 25081 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 25022 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || || || ||| ||||| || || ||||| || |||| Sbjct 25021 GACACGATTGA--CAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACC 24964 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || || || || || || || |||| ||||| || ||| |||| Sbjct 24963 AACAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACA 24904 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || ||||| ||||| || || || || || || Sbjct 24903 ACATCCAAAAGGAATCTACTCTGCACTTGGTCCT 24870 >seq2869 Length=12228 Score = 93.3 bits (102), Expect = 4e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || |||||| |||| || || ||||||| | || || ||||| || ||||| ||| Sbjct 5661 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 5720 Query 25068 GAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || ||||| | || | ||| ||||| || || ||||| |||||||||||||| | Sbjct 5721 GACAATGTGAAGTCCAAGATTCAG-GACAAGGAGGGAATTCCCCCTGACCAACAGCGTCT 5779 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 ||| ||||| ||||| || || || || | || ||| | ||| ||||| || || || Sbjct 5780 TATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAA 5839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433290889113005