Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734395.1_202014-07-28] 8,371 sequences; 36,788,781 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5174 152 6e-32 >seq5174 Length=12438 Score = 152 bits (168), Expect = 6e-32 Identities = 444/675 (66%), Gaps = 28/675 (4%) Strand=Plus/Minus Query 115526 TGAACTGAATGGGTCT---CGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGA 115582 |||||||||| || || || || |||| | || ||||||||||| || ||||||| Sbjct 11159 TGAACTGAATCGG-CTGGGCGGCT--GCCTGCGTCCGCAGGTAGTACATGCCGGTCTTGA 11103 Query 115583 GCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCA 115642 | || |||||||| | | |||||| |||| | |||| | || || || Sbjct 11102 GACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGGGTCGCGCA 11043 Query 115643 TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAA 115702 || || ||| | ||||| || || |||||| || || || || ||||| | || Sbjct 11042 TGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGAA 10983 Query 115703 TCACA-TCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761 || | | | | ||| ||||| ||||| ||||||| ||||| |||| || ||| Sbjct 10982 CGACGGTACGTTG-CGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATCCTCAGGG 10924 Query 115762 ATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGA---TCCTTCATATCC 115818 || | || || ||||| ||||| || || | | |||| | | |||||| || Sbjct 10923 ATGCTGGCAATGTTCTGGATGGAGCCTCC---CTCGGCGATGATACGGTTCTTCATGTCG 10867 Query 115819 TTTGACCAGAGACCAATCTTCTTGAGATCCT----CCACGAGGTGCTTATTGACAACAAC 115874 | |||||| ||||||| || ||||||| | || ||| | ||||| || Sbjct 10866 TCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGG----TTGACTACCTG 10811 Query 115875 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTC 115934 ||||| || || || || | | || ||||||| || || |||||||||||||| Sbjct 10810 GAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACTC 10751 Query 115935 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 ||||| || | |||||| | ||| ||||| |||||||| || | ||| | |||||| Sbjct 10750 GTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGTT 10691 Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT-- 116052 ||||| ||| | | ||| ||||||| ||||||||||| | ||| | | Sbjct 10690 GCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCA---GAGGTCTGA 10634 Query 116053 -GTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAA 116111 | || | | |||||| || ||||||| || || || || | || |||||||| | Sbjct 10633 AGGCTTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCTCGTA 10574 Query 116112 TGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATA 116171 |||| ||||| |||| |||| || | | | | || || || ||||| || Sbjct 10573 TGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTCAGAGCAGCGTGGTA 10514 Query 116172 CATTGTCTCAAAAAT 116186 || |||||||| || Sbjct 10513 GATGGTCTCAAAGAT 10499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613443004140360