Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734405.1_202014-07-28] 7,798 sequences; 36,113,398 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4329 318 5e-82 seq2749 140 3e-28 seq5701 86.0 6e-12 >seq4329 Length=8190 Score = 318 bits (352), Expect = 5e-82 Identities = 1205/1882 (64%), Gaps = 26/1882 (1%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || || ||||| || | | ||||| | | || || || || |||||||| Sbjct 6920 CTGGTCGACAGTGAACTGAATCGGCTGGGCGGCTGCCTGCGTCCGCAGGTAGTACATGCC 6861 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||| ||||| | |||||| || ||||| ||||| || | || || |||| Sbjct 6860 GGTCTTGAGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGG 6801 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | ||||| | |||| |||||| ||| || || || || || || || ||||| Sbjct 6800 GTCGCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGC 6741 Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 ||| | | | ||||| ||| || ||||| || |||||||| || | | || | || Sbjct 6740 CATCTGAACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATC 6681 Query 22345 TAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAAT 22404 || || | || |||||| ||| || | | ||||| || || || Sbjct 6680 CTCAGGGATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTTCAT 6621 Query 22405 CGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTG 22464 || ||||| ||| | || || ||| |||| || |||| || || || Sbjct 6620 GTCGTCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACTACCTG 6561 Query 22465 AAACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523 |||||||||| |||| || |||||||||||||||||||| || | || || || | | Sbjct 6560 GAACTCGCCGG-CAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACT 6502 Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583 | ||||| || || || || | || ||| || ||||| || || | || | || Sbjct 6501 CGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGT 6442 Query 22584 TTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA 22641 | | | || || | |||| || || |||| || ||||||||| || || || Sbjct 6441 TGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTC--CCAGTCCCAGAGGTCTGA 6384 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 ||| | || || |||||| ||||| || | | || | | || || || Sbjct 6383 AGGCTTGACGTT---CCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCTC 6327 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 ||| || ||| ||||| | | | ||||| | ||| || || || ||| Sbjct 6326 GTATGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTCAGAGCAGCGTG 6267 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTTTCGTACG 22817 || || ||||| ||||| |||||||| | || || || ||| ||| | | Sbjct 6266 GTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAGAC----TCGAAAG 6211 Query 22818 GCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877 ||| ||| | | ||| ||||| |||| ||| || ||||| | |||||| || | || Sbjct 6210 GCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGATAGGCCTGT 6151 Query 22878 TTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCT 22935 || || | || |||||| | | || || | || ||||| | | Sbjct 6150 GGCGCATGTTG--CTGTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTCGATGATCTT 6093 Query 22936 GTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC 22995 ||| | ||| | || | || || | ||||||||||| | || Sbjct 6092 GTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTCGTATTCACC 6033 Query 22996 CGATTG-TA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTC 23052 | || || | || |||| | | || | || ||||| |||||||| || ||||| Sbjct 6032 CTTGTGGTAGTCGACGAACTGGGGCAGAGCCAGGGAAGCAAGGTTGCATACAGCAACCTC 5973 Query 23053 GTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAA 23112 ||| || | |||||| | ||| || || || || ||| | || || || | Sbjct 5972 GTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCGAATGGTACCAAG 5913 Query 23113 ATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGT 23172 || |||||||||| || || ||||| ||||||||| |||||| |||| | || || Sbjct 5912 GTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGT 5853 Query 23173 CTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTA 23232 ||| ||| | ||| | ||| | ||| | |||| || | | |||| || Sbjct 5852 CTCAGTCTGAGCCTCCAGGATGGAATACCAAAGTTTCTGGGCCTTGAT-CGTCTTGCGAC 5794 Query 23233 CCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGG 23291 ||| || | | ||| ||||| | |||| || || || || ||||||| ||||| | Sbjct 5793 CCTTACCGGCCTGCTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAGCAGTCCG 5734 Query 23292 CCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTC 23351 | ||||| || | | |||| ||||| | |||| || || |||||||| Sbjct 5733 CGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCT 5674 Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| || ||||| || ||||| |||||| |||||| || ||||| || | |||||| | Sbjct 5673 TCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCT 5614 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 | ||| |||||| | | || | || || || || || || ||||||||||| |||| Sbjct 5613 TTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGT 5554 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 | | |||||| || || || | ||| ||||| ||||| |||||||| || || ||||||| Sbjct 5553 AGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGT 5494 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591 || |||| | ||||| || || | ||||| || | |||| || || | | | Sbjct 5493 TGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGG 5434 Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651 | || | || || | | || |||| || ||| || || || || || || |||| Sbjct 5433 AGCCAGTGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAGCCATCTTGGAGATCA 5374 Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711 | || || || || ||||||||||| ||||| |||||||| || || | | |||| Sbjct 5373 TGGCACAAGTCTTGAGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCATATCAACCA 5314 Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771 ||| || || |||| || || | || || |||| ||| || |||||| ||||| Sbjct 5313 GGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGT 5254 Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTC 23831 | || ||| || | ||||| || ||||| || |||||| | ||||||| || | Sbjct 5253 GTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCAC 5194 Query 23832 CGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGT 23891 | ||||| | || || ||||| ||||||| || || |||||||| | ||| | Sbjct 5193 CCCAGATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCTTGCCAT 5134 Query 23892 TAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGT 23951 | | || || || || || | | | || || || || ||||| | ||||| || | Sbjct 5133 TGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGAAAT 5074 Query 23952 CACGATCGTGCACTATGGCCGA 23973 |||| |||| || || || || Sbjct 5073 CACGGTCGTAGACAATAGCTGA 5052 >seq2749 Length=7798 Score = 140 bits (154), Expect = 3e-28 Identities = 305/455 (67%), Gaps = 4/455 (1%) Strand=Plus/Minus Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 || ||||| ||||| | |||||| ||||| ||||| || ||||| | || || Sbjct 629 CTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCCATCTTC 570 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| | ||||| || ||||||||||| || ||||| || ||||||| | || ||||| Sbjct 569 TGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCGCGT 510 Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG 58154 || |||||||| || || || ||||| || || ||| ||| | | | ||| | || Sbjct 509 GATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCC 450 Query 58155 ACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 | ||| | ||| ||| | ||| || ||| ||| || | |||||| | Sbjct 449 AACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAGATTGAGCAAGAGTTTCTT 390 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || | || ||| | || || |||||| | ||||| |||||||| Sbjct 389 ACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACCTGATGAAGCAGTACATT 330 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 |||||||| || ||||||||| | ||| || || |||| ||| ||| | | Sbjct 329 GAGTTTGTCGCTGACAGACTTCTTGTCGCCCTGGGAAACGAGAAGGTC--TACCGTGCCA 272 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaa 58392 || || || ||||||||| | ||||| |||| |||||||| ||||| ||||| | Sbjct 271 CCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGCAAGACCAACTTCTTCGAGA 212 Query 58393 aaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 || ||| |||| || |||||| ||| || ||| Sbjct 211 AACGCGTTGGCGAGTACCAAAAAGCCGGTGTCATG 177 >seq5701 Length=12228 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||||||||| ||||| || |||||| | || || || | || |||| || Sbjct 5660 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 5719 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | || || | || ||||||||| || | || || ||||| |||||||| Sbjct 5720 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTT 5779 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGAC 31348 || || |||||||| |||||||| ||| Sbjct 5780 ATCTTTGCTGGCAAGCAGTTGGAGGAC 5806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445722948920160