Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734425.1_202014-07-28]
8,649 sequences; 36,315,912 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq5346 102 7e-16
>seq5346
Length=29671
Score = 102 bits (112), Expect = 7e-16
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|||||||| ||||| || || || || || |||||||||||||| || ||||||
Sbjct 24639 AGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCTT 24698
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
||| || || || || || ||||| || | | ||| || ||||| || || || ||
Sbjct 24699 CCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCCTCC 24758
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGT 563435
|| |||||||| ||| ||| || || ||||| || | || | | |||||| ||
Sbjct 24759 TTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTG-AAGATTCAACTTCGAGTGT 24817
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| ||||| || ||||| || || ||||| |||||||||
Sbjct 24818 GATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCATA 24857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028838601873010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |