Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734455.1_202014-07-28] 8,119 sequences; 36,391,227 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq559 170 2e-37 seq5093 131 2e-25 seq7922 122 9e-23 seq3043 102 8e-17 >seq559 Length=9703 Score = 170 bits (188), Expect = 2e-37 Identities = 278/395 (70%), Gaps = 4/395 (1%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| ||| | |||||| ||| || || | |||| | | ||||| Sbjct 2585 AGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACCTTTGCCACGCGCC 2526 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 || | || ||||| | ||||||||| ||||||| || ||| ||| |||| || | Sbjct 2525 TGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCCATCTTCT 2466 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || ||||| ||||| || ||||||||| ||||||||||||||| | | Sbjct 2465 GGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCGCGTG 2406 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 | |||||||| || ||||||||||||| | |||||| || || | | || | Sbjct 2405 ATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCCA 2346 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 | || | || | |||||| || ||| || ||| || ||||| || || | Sbjct 2345 ACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAGATTGAGCAAGAGTTTCTTA 2286 Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 | || ||| |||| |||| || ||||| | || || || | |||| ||| ||||| Sbjct 2285 CGGAGGCGTTGCC-CTGCGCCCTCCTGGGCATGAA-CGCCAACCTGATGAAGCAGTACAT 2228 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGG 117374 ||||| ||||| ||||| || || ||| |||| Sbjct 2227 TGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTGG 2193 Score = 149 bits (164), Expect = 6e-31 Identities = 208/286 (73%), Gaps = 7/286 (2%) Strand=Plus/Minus Query 116637 TGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGT 116696 |||||| |||||||| ||||||||||| || |||||||| | ||| ||| | || ||| Sbjct 3001 TGTGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACGGCCGAAGAGATTGATTTGT 2942 Query 116697 CCAAGGA-CACGAGCGACTGGGAGCGCTTGAAC---GACAACGAGCGCCATTTCATCAAG 116752 ||||||| | | | ||||||| | | | | || | || | |||||| Sbjct 2941 CCAAGGATCTCCA-CGACTGGAACAACAAGCTCACAGATGATGAAAAGTACTTCATCTCA 2883 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || || || |||||||| || ||||||||||||||||| || || ||||| Sbjct 2882 CACATCCTTGCATTCTTCGCCGCTTCTGATGGCATCGTCAACGAGAACCTCGTTGAGCGA 2823 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | || | ||| | ||||||| || |||||||||||||| |||||| || Sbjct 2822 TTCAGCGCCGAAG-TCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGAT 2764 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||| | ||||| || | || ||| ||| |||||||||||| Sbjct 2763 GGAGAACATTCACTCCGAGACTTACTCGCTCCTGATCGACACGTAC 2718 >seq5093 Length=26073 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || |||||| | || || || | | | Sbjct 14203 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 14144 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| |||||| |||||||| Sbjct 14143 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 14084 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || ||||| ||||| || |||| | ||||| |||||||||| Sbjct 14083 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 14024 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| ||| || || || ||| |||| Sbjct 14023 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCG 13989 >seq7922 Length=20657 Score = 122 bits (134), Expect = 9e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||||| || |||||||||||||| |||| || ||| | | Sbjct 16050 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 15991 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||| ||| |||| ||||| ||||| ||||| | ||||| Sbjct 15990 GACACAATCGACAACG-TCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCA 15932 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| | |||| |||||||| |||||||| || | | ||||| || ||||| Sbjct 15931 ACAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGAAGAACCCTGTCTGATTACAA 15872 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||||||| | || ||||| || ||| Sbjct 15871 TATTCAGAAGGAGTCGACTCTGCACCTTGTG 15841 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| |||||||| | || ||||| | | Sbjct 16278 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 16219 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | | || || | | | ||||| ||||| || || ||||||| Sbjct 16218 GACACGATTGACAATGTTAAATCCAAGA-TCCAAGACAAGGAGGGTATTCCTCCGGACCA 16160 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||||| |||| ||| || || ||| |||| || | ||||| || ||||||||| Sbjct 16159 ACAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAA 16100 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||| ||||| | || ||||| Sbjct 16099 CATCCAAAAGGAATCTACTCTGCA 16076 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||| ||||| ||||||||| |||| || || | | ||| | | | | | | ||| Sbjct 16484 TCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAATGTAAAGT 16425 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 || || | ||||| ||||| || || ||||||| ||||| || || | ||| || | Sbjct 16424 CGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAACAACGCCTTATTTTCGCTGGAA 16365 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 | ||||| || |||| || ||||| ||||||||||||||| |||||| ||| || | Sbjct 16364 AGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACAACATCCAAAAGGAGAGCACCCTCC 16305 Query 40892 AT 40893 || Sbjct 16304 AT 16303 >seq3043 Length=31884 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || || ||||| ||||||||| | || ||||| || | |||| | Sbjct 26227 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 26168 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | | ||| || |||| ||||| ||||| || ||| | ||||| || || || Sbjct 26167 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTT 26108 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || ||||| ||| |||| |||| || || ||| ||||||||||||||||||| Sbjct 26107 ATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAAG 26048 Query 40879 G 40879 | Sbjct 26047 G 26047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515166911691440