Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734455.1_202014-07-28] 8,119 sequences; 36,391,227 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq7922 93.3 4e-14 seq5093 89.7 4e-13 >seq7922 Length=20657 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTC 48576 || ||||| || |||||||||||||| |||||||| || | || || || ||||||| Sbjct 16298 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTC-GGAAAGGGTCCGACCGTCCTC 16356 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| || || |||| | || || || ||| || | || ||||||||| Sbjct 16357 AAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 16416 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || ||| ||| | | | ||||||||| |||||||| ||||| || ||||| || Sbjct 16417 GATCTTCGACTTTACATTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTT 16476 Query 48697 ACCGGTGA 48704 || |||| Sbjct 16477 GCCAGTGA 16484 >seq5093 Length=26073 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTC--GCTCGTCCTCCAGCT 48581 || || ||||||||||| || |||||||| || | | | ||| || ||||||| |||| Sbjct 14001 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC-AGGGTCCTGC-CGTCCTCAAGCT 14058 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| ||| | | || || |||||||| ||| || | || ||||||||| || | Sbjct 14059 GCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCT 14118 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 | ||||| | | ||||| ||| | |||||| ||| | || || || || || | Sbjct 14119 TGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCG 14178 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 |||| || || || || |||||||| Sbjct 14179 TGAGGGTCTTGACGAAGATCTGCAT 14203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421209517062119